G2222073


Basic Information

Item Value
gene id G2222073
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 30402562 ~ 30402772 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2541409
ctctaagaagcttctaaagccaagacatcattttctgtaattctccaagctgtttaaaggcacagtcaacttagtgtatgtaaacttctgactcactggaattgtgatacagtgaattataagtgaaataatctgtctgtaaacaattgttggaaaatgtacttgtgtcatgcacaaagtagatgtcctaaccgacttgccaaaactatag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2541409 True 211 lncRNA 0.36 1 30402562 30402772

Neighbor

gene id symbol gene type direction distance location
LOC110521693 LOC106584143 coding upstream 797653 29598550 ~ 29604909 (+)
LOC110521691 LOC106584140 coding upstream 1098622 29284901 ~ 29303940 (+)
LOC100135939 LOC106584136 coding upstream 1248858 29130397 ~ 29153704 (+)
paics LOC106584129 coding upstream 1401070 28992608 ~ 29001492 (+)
si:dkeyp-117h8.4 LOC106584130 coding upstream 1413987 28983183 ~ 28988575 (+)
LOC110521700 NA coding downstream 133464 30536236 ~ 30548668 (+)
LOC110521701 LOC106584149 coding downstream 443909 30846681 ~ 30850528 (+)
si:ch211-117l17.6 NA coding downstream 456066 30858838 ~ 30860485 (+)
LOC110521703 LOC106584150 coding downstream 460852 30863624 ~ 30866524 (+)
rgs2 LOC106584094 coding downstream 475914 30878686 ~ 30880955 (+)
G2222064 NA non-coding upstream 16122 30385967 ~ 30386440 (+)
G2222057 NA non-coding upstream 44829 30357493 ~ 30357733 (+)
G2222056 NA non-coding upstream 47032 30355304 ~ 30355530 (+)
G2221861 NA non-coding upstream 303159 30071562 ~ 30099403 (+)
G2221859 NA non-coding upstream 332146 30069748 ~ 30070416 (+)
G2222275 NA non-coding downstream 1145 30403917 ~ 30404124 (+)
G2222290 NA non-coding downstream 9310 30412082 ~ 30412310 (+)
G2222519 NA non-coding downstream 158297 30561069 ~ 30561526 (+)
G2222527 NA non-coding downstream 162664 30565436 ~ 30565649 (+)
G2222542 NA non-coding downstream 171745 30574517 ~ 30574827 (+)
G2220253 NA other upstream 1380680 29021586 ~ 29021882 (+)
G2219991 NA other upstream 1853084 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 1854478 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 2095236 28260830 ~ 28307538 (+)
LOC110521656 LOC106584103 other upstream 2558864 27823914 ~ 27844041 (+)
G2225948 NA other downstream 3169368 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 4779197 35181902 ~ 35190209 (+)
G2228777 NA other downstream 5115462 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 5290538 35693310 ~ 35735400 (+)

Expression


Co-expression Network