G2222290


Basic Information

Item Value
gene id G2222290
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 30412082 ~ 30412310 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2541633
ggtcttgaaaaagaagggtcaacactgcaaatattgactctttgcatcaacttcatgtaattgtcaataaaagcctttgatacTTATGagatgcttgtaattatacttcagcatcccatagtaacatctgacaaaaatatctaaagacactgaagcagcaaactttgtagaaattcatatttgtgtcattctcaaaacttttggccacgactgtatatggtattttata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2541633 True 229 lncRNA 0.33 1 30412082 30412310

Neighbor

gene id symbol gene type direction distance location
LOC110521693 LOC106584143 coding upstream 807173 29598550 ~ 29604909 (+)
LOC110521691 LOC106584140 coding upstream 1108142 29284901 ~ 29303940 (+)
LOC100135939 LOC106584136 coding upstream 1258378 29130397 ~ 29153704 (+)
paics LOC106584129 coding upstream 1410590 28992608 ~ 29001492 (+)
si:dkeyp-117h8.4 LOC106584130 coding upstream 1423507 28983183 ~ 28988575 (+)
LOC110521700 NA coding downstream 123926 30536236 ~ 30548668 (+)
LOC110521701 LOC106584149 coding downstream 434371 30846681 ~ 30850528 (+)
si:ch211-117l17.6 NA coding downstream 446528 30858838 ~ 30860485 (+)
LOC110521703 LOC106584150 coding downstream 451314 30863624 ~ 30866524 (+)
rgs2 LOC106584094 coding downstream 466376 30878686 ~ 30880955 (+)
G2222275 NA non-coding upstream 7958 30403917 ~ 30404124 (+)
G2222073 NA non-coding upstream 9310 30402562 ~ 30402772 (+)
G2222064 NA non-coding upstream 25642 30385967 ~ 30386440 (+)
G2222057 NA non-coding upstream 54349 30357493 ~ 30357733 (+)
G2222056 NA non-coding upstream 56552 30355304 ~ 30355530 (+)
G2222519 NA non-coding downstream 148759 30561069 ~ 30561526 (+)
G2222527 NA non-coding downstream 153126 30565436 ~ 30565649 (+)
G2222542 NA non-coding downstream 162207 30574517 ~ 30574827 (+)
G2222559 NA non-coding downstream 174726 30587036 ~ 30587235 (+)
G2222563 NA non-coding downstream 180478 30592788 ~ 30593126 (+)
G2220253 NA other upstream 1390200 29021586 ~ 29021882 (+)
G2219991 NA other upstream 1862604 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 1863998 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 2104756 28260830 ~ 28307538 (+)
LOC110521656 LOC106584103 other upstream 2568384 27823914 ~ 27844041 (+)
G2225948 NA other downstream 3159830 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 4769659 35181902 ~ 35190209 (+)
G2228777 NA other downstream 5105924 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 5281000 35693310 ~ 35735400 (+)

Expression


Co-expression Network