G2222519


Basic Information

Item Value
gene id G2222519
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 30561069 ~ 30561526 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2541878
gtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttttgtttttgcgttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatcttcatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgcatgcacattatcgaacaaaacatacatgtattgtgtaacatgatgtcctatgagtgtcatctgaggaagatcatcaaaggttagtgattaatttgatctatatttctgctttttgtgactcctatctttggctggaaaaatggctgtgttttttcgacttgaaggtgatctaacataatcatatgttgtgctttagctgtaaagcatttttttaaatcggaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2541878 True 458 lncRNA 0.36 1 30561069 30561526

Neighbor

gene id symbol gene type direction distance location
LOC110521700 NA coding upstream 12401 30536236 ~ 30548668 (+)
LOC110521693 LOC106584143 coding upstream 956160 29598550 ~ 29604909 (+)
LOC110521691 LOC106584140 coding upstream 1257129 29284901 ~ 29303940 (+)
LOC100135939 LOC106584136 coding upstream 1407365 29130397 ~ 29153704 (+)
paics LOC106584129 coding upstream 1559577 28992608 ~ 29001492 (+)
LOC110521701 LOC106584149 coding downstream 285155 30846681 ~ 30850528 (+)
si:ch211-117l17.6 NA coding downstream 297312 30858838 ~ 30860485 (+)
LOC110521703 LOC106584150 coding downstream 302098 30863624 ~ 30866524 (+)
rgs2 LOC106584094 coding downstream 317160 30878686 ~ 30880955 (+)
LOC110521706 NA coding downstream 360367 30921893 ~ 30926393 (+)
G2222290 NA non-coding upstream 148759 30412082 ~ 30412310 (+)
G2222275 NA non-coding upstream 156945 30403917 ~ 30404124 (+)
G2222073 NA non-coding upstream 158297 30402562 ~ 30402772 (+)
G2222064 NA non-coding upstream 174629 30385967 ~ 30386440 (+)
G2222057 NA non-coding upstream 203336 30357493 ~ 30357733 (+)
G2222527 NA non-coding downstream 3910 30565436 ~ 30565649 (+)
G2222542 NA non-coding downstream 12991 30574517 ~ 30574827 (+)
G2222559 NA non-coding downstream 25510 30587036 ~ 30587235 (+)
G2222563 NA non-coding downstream 31262 30592788 ~ 30593126 (+)
G2222579 NA non-coding downstream 54238 30615764 ~ 30615982 (+)
G2220253 NA other upstream 1539187 29021586 ~ 29021882 (+)
G2219991 NA other upstream 2011591 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 2012985 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 2253743 28260830 ~ 28307538 (+)
LOC110521656 LOC106584103 other upstream 2717371 27823914 ~ 27844041 (+)
G2225948 NA other downstream 3010614 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 4620443 35181902 ~ 35190209 (+)
G2228777 NA other downstream 4956708 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 5131784 35693310 ~ 35735400 (+)

Expression


Co-expression Network