G2222527


Basic Information

Item Value
gene id G2222527
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 30565436 ~ 30565649 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2541886
ttattattactattggatagaaaacagtctgaagtttctaaaactgtttgaattatgtctgtgagtataacagaactcatagggcaggcaaacttccaaacaggaagtggaaattctggggctggttgattttcaactcatcgcctattcacacttcctacgccttccactagatgtcaacagtcagtagaacgtggaatgaagcctctagtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2541886 True 214 lncRNA 0.40 1 30565436 30565649

Neighbor

gene id symbol gene type direction distance location
LOC110521700 NA coding upstream 16768 30536236 ~ 30548668 (+)
LOC110521693 LOC106584143 coding upstream 960527 29598550 ~ 29604909 (+)
LOC110521691 LOC106584140 coding upstream 1261496 29284901 ~ 29303940 (+)
LOC100135939 LOC106584136 coding upstream 1411732 29130397 ~ 29153704 (+)
paics LOC106584129 coding upstream 1563944 28992608 ~ 29001492 (+)
LOC110521701 LOC106584149 coding downstream 281032 30846681 ~ 30850528 (+)
si:ch211-117l17.6 NA coding downstream 293189 30858838 ~ 30860485 (+)
LOC110521703 LOC106584150 coding downstream 297975 30863624 ~ 30866524 (+)
rgs2 LOC106584094 coding downstream 313037 30878686 ~ 30880955 (+)
LOC110521706 NA coding downstream 356244 30921893 ~ 30926393 (+)
G2222519 NA non-coding upstream 3910 30561069 ~ 30561526 (+)
G2222290 NA non-coding upstream 153126 30412082 ~ 30412310 (+)
G2222275 NA non-coding upstream 161312 30403917 ~ 30404124 (+)
G2222073 NA non-coding upstream 162664 30402562 ~ 30402772 (+)
G2222064 NA non-coding upstream 178996 30385967 ~ 30386440 (+)
G2222542 NA non-coding downstream 8868 30574517 ~ 30574827 (+)
G2222559 NA non-coding downstream 21387 30587036 ~ 30587235 (+)
G2222563 NA non-coding downstream 27139 30592788 ~ 30593126 (+)
G2222579 NA non-coding downstream 50115 30615764 ~ 30615982 (+)
G2222586 NA non-coding downstream 54592 30620241 ~ 30620536 (+)
G2220253 NA other upstream 1543554 29021586 ~ 29021882 (+)
G2219991 NA other upstream 2015958 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 2017352 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 2258110 28260830 ~ 28307538 (+)
LOC110521656 LOC106584103 other upstream 2721738 27823914 ~ 27844041 (+)
G2225948 NA other downstream 3006491 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 4616320 35181902 ~ 35190209 (+)
G2228777 NA other downstream 4952585 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 5127661 35693310 ~ 35735400 (+)

Expression


Co-expression Network