G2222542


Basic Information

Item Value
gene id G2222542
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 30574517 ~ 30574827 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2541901
GAAAGGGGagtggcttgcaagccgaatacactgtcccaaccgtgaagcactggggtggcagcatcatgttgtgggggtgctttgctgctggagggactggtgcacttcacaaaatagatggcatgaggcaggaaaattatgtggatatattgatgcagcatctcaagacatcagtcaggaagttaaggcttggtcgcaaatgggtcctccaaatggacaatgacaccaagcatacttccaaagttttggagaaacggcttaaggacagcaaagccAAGGTatgggagtggccatcacaaagccctgacctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2541901 True 311 lncRNA 0.50 1 30574517 30574827

Neighbor

gene id symbol gene type direction distance location
LOC110521700 NA coding upstream 25849 30536236 ~ 30548668 (+)
LOC110521693 LOC106584143 coding upstream 969608 29598550 ~ 29604909 (+)
LOC110521691 LOC106584140 coding upstream 1270577 29284901 ~ 29303940 (+)
LOC100135939 LOC106584136 coding upstream 1420813 29130397 ~ 29153704 (+)
paics LOC106584129 coding upstream 1573025 28992608 ~ 29001492 (+)
LOC110521701 LOC106584149 coding downstream 271854 30846681 ~ 30850528 (+)
si:ch211-117l17.6 NA coding downstream 284011 30858838 ~ 30860485 (+)
LOC110521703 LOC106584150 coding downstream 288797 30863624 ~ 30866524 (+)
rgs2 LOC106584094 coding downstream 303859 30878686 ~ 30880955 (+)
LOC110521706 NA coding downstream 347066 30921893 ~ 30926393 (+)
G2222527 NA non-coding upstream 8868 30565436 ~ 30565649 (+)
G2222519 NA non-coding upstream 12991 30561069 ~ 30561526 (+)
G2222290 NA non-coding upstream 162207 30412082 ~ 30412310 (+)
G2222275 NA non-coding upstream 170393 30403917 ~ 30404124 (+)
G2222073 NA non-coding upstream 171745 30402562 ~ 30402772 (+)
G2222559 NA non-coding downstream 12209 30587036 ~ 30587235 (+)
G2222563 NA non-coding downstream 17961 30592788 ~ 30593126 (+)
G2222579 NA non-coding downstream 40937 30615764 ~ 30615982 (+)
G2222586 NA non-coding downstream 45414 30620241 ~ 30620536 (+)
G2222639 NA non-coding downstream 87382 30662209 ~ 30662577 (+)
G2220253 NA other upstream 1552635 29021586 ~ 29021882 (+)
G2219991 NA other upstream 2025039 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 2026433 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 2267191 28260830 ~ 28307538 (+)
LOC110521656 LOC106584103 other upstream 2730819 27823914 ~ 27844041 (+)
G2225948 NA other downstream 2997313 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 4607142 35181902 ~ 35190209 (+)
G2228777 NA other downstream 4943407 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 5118483 35693310 ~ 35735400 (+)

Expression


Co-expression Network