G2222713


Basic Information

Item Value
gene id G2222713
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 30711729 ~ 30711934 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2542072
gggacactaatccgctCTCTAATAAGatatcctgctatgccctcagacgaaccatcaaacaggcaaagcgttaatacaggactaagattgaatcctactacaccggctctgacactcgtcggatgtggcagggcttgcaaactattacggactacaaagggaaacccagctgcgaactgcccagtgacgtgagcctaccagacgag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2542072 True 206 lncRNA 0.50 1 30711729 30711934

Neighbor

gene id symbol gene type direction distance location
LOC110521700 NA coding upstream 163061 30536236 ~ 30548668 (+)
LOC110521693 LOC106584143 coding upstream 1106820 29598550 ~ 29604909 (+)
LOC110521691 LOC106584140 coding upstream 1407789 29284901 ~ 29303940 (+)
LOC100135939 LOC106584136 coding upstream 1558025 29130397 ~ 29153704 (+)
paics LOC106584129 coding upstream 1710237 28992608 ~ 29001492 (+)
LOC110521701 LOC106584149 coding downstream 134747 30846681 ~ 30850528 (+)
si:ch211-117l17.6 NA coding downstream 146904 30858838 ~ 30860485 (+)
LOC110521703 LOC106584150 coding downstream 151690 30863624 ~ 30866524 (+)
rgs2 LOC106584094 coding downstream 166752 30878686 ~ 30880955 (+)
LOC110521706 NA coding downstream 209959 30921893 ~ 30926393 (+)
G2222639 NA non-coding upstream 49152 30662209 ~ 30662577 (+)
G2222586 NA non-coding upstream 91193 30620241 ~ 30620536 (+)
G2222579 NA non-coding upstream 95747 30615764 ~ 30615982 (+)
G2222563 NA non-coding upstream 118603 30592788 ~ 30593126 (+)
G2222559 NA non-coding upstream 124494 30587036 ~ 30587235 (+)
G2222732 NA non-coding downstream 14027 30725961 ~ 30726441 (+)
G2222733 NA non-coding downstream 14675 30726609 ~ 30726982 (+)
G2222780 NA non-coding downstream 46080 30758014 ~ 30758271 (+)
G2222860 NA non-coding downstream 90224 30802158 ~ 30802460 (+)
G2222914 NA non-coding downstream 160666 30872600 ~ 30873052 (+)
G2220253 NA other upstream 1689847 29021586 ~ 29021882 (+)
G2219991 NA other upstream 2162251 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 2163645 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 2404403 28260830 ~ 28307538 (+)
LOC110521656 LOC106584103 other upstream 2868031 27823914 ~ 27844041 (+)
G2225948 NA other downstream 2860206 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 4470035 35181902 ~ 35190209 (+)
G2228777 NA other downstream 4806300 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 4981376 35693310 ~ 35735400 (+)

Expression


Co-expression Network