G2222733


Basic Information

Item Value
gene id G2222733
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 30726609 ~ 30726982 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2542092
aatcatcaaggtgtttttcacatatctcttcattgatacatcgttcttggacacatgctttctcccctgaatcaaatggtaaagtagaagcagctggcaattgcgcaccgaattcgacgcaggacaccaggcggacacttggaaaatgtagtctcttatggtcaatcttccaatgatatgcctacaaatacgtcacaatgctgctaagaccttgggcgaacgacagaaagtgtaggctcattccttgcacaatcacagccatataaggagacaatggaaaacagagcttcagaaattctgctaattcctggttgatgcatcatcttggtttcgcctgtagaatgagttctggggcacttacagacaaattctga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2542092 True 374 lncRNA 0.43 1 30726609 30726982

Neighbor

gene id symbol gene type direction distance location
LOC110521700 NA coding upstream 177941 30536236 ~ 30548668 (+)
LOC110521693 LOC106584143 coding upstream 1121700 29598550 ~ 29604909 (+)
LOC110521691 LOC106584140 coding upstream 1422669 29284901 ~ 29303940 (+)
LOC100135939 LOC106584136 coding upstream 1572905 29130397 ~ 29153704 (+)
paics LOC106584129 coding upstream 1725117 28992608 ~ 29001492 (+)
LOC110521701 LOC106584149 coding downstream 119699 30846681 ~ 30850528 (+)
si:ch211-117l17.6 NA coding downstream 131856 30858838 ~ 30860485 (+)
LOC110521703 LOC106584150 coding downstream 136642 30863624 ~ 30866524 (+)
rgs2 LOC106584094 coding downstream 151704 30878686 ~ 30880955 (+)
LOC110521706 NA coding downstream 194911 30921893 ~ 30926393 (+)
G2222732 NA non-coding upstream 168 30725961 ~ 30726441 (+)
G2222713 NA non-coding upstream 14675 30711729 ~ 30711934 (+)
G2222639 NA non-coding upstream 64032 30662209 ~ 30662577 (+)
G2222586 NA non-coding upstream 106073 30620241 ~ 30620536 (+)
G2222579 NA non-coding upstream 110627 30615764 ~ 30615982 (+)
G2222780 NA non-coding downstream 31032 30758014 ~ 30758271 (+)
G2222860 NA non-coding downstream 75176 30802158 ~ 30802460 (+)
G2222914 NA non-coding downstream 145618 30872600 ~ 30873052 (+)
G2222883 LOC106584153 non-coding downstream 159646 30886628 ~ 30900111 (+)
G2222919 NA non-coding downstream 176868 30903850 ~ 30904125 (+)
G2220253 NA other upstream 1704727 29021586 ~ 29021882 (+)
G2219991 NA other upstream 2177131 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 2178525 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 2419283 28260830 ~ 28307538 (+)
LOC110521656 LOC106584103 other upstream 2882911 27823914 ~ 27844041 (+)
G2225948 NA other downstream 2845158 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 4454987 35181902 ~ 35190209 (+)
G2228777 NA other downstream 4791252 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 4966328 35693310 ~ 35735400 (+)

Expression


Co-expression Network