G2222914


Basic Information

Item Value
gene id G2222914
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 30872600 ~ 30873052 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2542286
GGGCCTTTGCCAGCAGTAGGTTTGGCAGAAGCTAGAAGGCCGGCGATGCCGAACACCTGAGCtggacaggagggggagccaaagcgaaggctggtgtgacacaatgttgttgatccatcctcagttttctcctatcgcaGCCATTTAAATCCGTAACtggtttaaaatcaccattggcctcgtggtgaaatctctgagcggtttccttcctcaccgttgactgagttaggaaggacacctgcatctttgtagtgactgggtgtactgatACATCATCcagagtgtaattaataacttaaccatgctcaaagggatatccaATGTCtgtaagggaccttacagataattgtatgtgtggggtacagagatggggtagccattcaaaaatcatgttttaAACAccactattgcacacagagttagtccatgcaacttattatctgACTTGGTAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2542286 True 453 lncRNA 0.46 1 30872600 30873052

Neighbor

gene id symbol gene type direction distance location
LOC110521703 LOC106584150 coding upstream 6076 30863624 ~ 30866524 (+)
si:ch211-117l17.6 NA coding upstream 12115 30858838 ~ 30860485 (+)
LOC110521701 LOC106584149 coding upstream 22072 30846681 ~ 30850528 (+)
LOC110521700 NA coding upstream 323932 30536236 ~ 30548668 (+)
LOC110521693 LOC106584143 coding upstream 1267691 29598550 ~ 29604909 (+)
rgs2 LOC106584094 coding downstream 5634 30878686 ~ 30880955 (+)
LOC110521706 NA coding downstream 48841 30921893 ~ 30926393 (+)
LOC110521707 LOC106584154 coding downstream 62403 30935455 ~ 30967780 (+)
LOC110521708 LOC106584155 coding downstream 105853 30978905 ~ 30989561 (+)
LOC118945898 NA coding downstream 295854 31168906 ~ 31168960 (+)
G2222860 NA non-coding upstream 70140 30802158 ~ 30802460 (+)
G2222780 NA non-coding upstream 114329 30758014 ~ 30758271 (+)
G2222733 NA non-coding upstream 145618 30726609 ~ 30726982 (+)
G2222732 NA non-coding upstream 146159 30725961 ~ 30726441 (+)
G2222713 NA non-coding upstream 160666 30711729 ~ 30711934 (+)
G2222883 LOC106584153 non-coding downstream 13576 30886628 ~ 30900111 (+)
G2222919 NA non-coding downstream 30798 30903850 ~ 30904125 (+)
G2222933 NA non-coding downstream 51475 30924527 ~ 30924773 (+)
G2222939 NA non-coding downstream 60528 30933580 ~ 30933949 (+)
G2222950 NA non-coding downstream 72311 30945363 ~ 30945954 (+)
G2220253 NA other upstream 1850718 29021586 ~ 29021882 (+)
G2219991 NA other upstream 2323122 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 2324516 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 2565274 28260830 ~ 28307538 (+)
G2225948 NA other downstream 2699088 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 4308917 35181902 ~ 35190209 (+)
G2228777 NA other downstream 4645182 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 4820258 35693310 ~ 35735400 (+)
LOC110521770 igfbp-1a2 other downstream 4927980 35800643 ~ 35805071 (+)

Expression


Co-expression Network