G2222933


Basic Information

Item Value
gene id G2222933
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 30924527 ~ 30924773 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2542305
ccatgctgcacattggtctgatccttgctactcctcctctgaAGGAGAGGAATTCCGTTacataactacaacctaaaacttcttgccttggaatattgaagactcctgttaaaaggaaccaccagctttcatatgttctcatgttctgagcaaggaacttaaacgttagctttttttacatggcacatattgcacttttactttcttctccaacactttgtttttgcattatttaaaccaaattgaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2542305 True 247 lncRNA 0.38 1 30924527 30924773

Neighbor

gene id symbol gene type direction distance location
rgs2 LOC106584094 coding upstream 43572 30878686 ~ 30880955 (+)
LOC110521703 LOC106584150 coding upstream 58003 30863624 ~ 30866524 (+)
si:ch211-117l17.6 NA coding upstream 64042 30858838 ~ 30860485 (+)
LOC110521701 LOC106584149 coding upstream 73999 30846681 ~ 30850528 (+)
LOC110521700 NA coding upstream 375859 30536236 ~ 30548668 (+)
LOC110521707 LOC106584154 coding downstream 10682 30935455 ~ 30967780 (+)
LOC110521708 LOC106584155 coding downstream 54132 30978905 ~ 30989561 (+)
LOC118945898 NA coding downstream 244133 31168906 ~ 31168960 (+)
LOC110521713 LOC106584160 coding downstream 719061 31643834 ~ 31657204 (+)
LOC110521714 LOC106584162 coding downstream 738405 31663178 ~ 31685070 (+)
G2222919 NA non-coding upstream 20402 30903850 ~ 30904125 (+)
G2222883 LOC106584153 non-coding upstream 24416 30886628 ~ 30900111 (+)
G2222914 NA non-coding upstream 51475 30872600 ~ 30873052 (+)
G2222860 NA non-coding upstream 122067 30802158 ~ 30802460 (+)
G2222780 NA non-coding upstream 166256 30758014 ~ 30758271 (+)
G2222939 NA non-coding downstream 8807 30933580 ~ 30933949 (+)
G2222950 NA non-coding downstream 20590 30945363 ~ 30945954 (+)
G2222931 NA non-coding downstream 43296 30968069 ~ 30969884 (+)
G2222967 NA non-coding downstream 45579 30970352 ~ 30970670 (+)
G2223075 NA non-coding downstream 48248 30973021 ~ 30973349 (+)
G2220253 NA other upstream 1902645 29021586 ~ 29021882 (+)
G2219991 NA other upstream 2375049 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 2376443 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 2617201 28260830 ~ 28307538 (+)
G2225948 NA other downstream 2647367 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 4257196 35181902 ~ 35190209 (+)
G2228777 NA other downstream 4593461 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 4768537 35693310 ~ 35735400 (+)
LOC110521770 igfbp-1a2 other downstream 4876259 35800643 ~ 35805071 (+)

Expression


Co-expression Network