G2223089


Basic Information

Item Value
gene id G2223089
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 30985221 ~ 30985453 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2542470
ggccattctcccccgattgccgggcggccagctctaggaagagtcttggtggttccaaacttcttccatttaagaaatatatatgccactgtgttcttgcagACCTTCAATGGTCAGAATTATTTTGGTAcacttccacagatctgtgccccgacacaatcctgtttcttGAGCTCTACGGCCAATTCCTTTgtcctcgtggcttggtttttgaactgtgggaccttatatag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2542470 True 233 lncRNA 0.47 1 30985221 30985453

Neighbor

gene id symbol gene type direction distance location
LOC110521707 LOC106584154 coding upstream 17441 30935455 ~ 30967780 (+)
LOC110521706 NA coding upstream 58828 30921893 ~ 30926393 (+)
rgs2 LOC106584094 coding upstream 104266 30878686 ~ 30880955 (+)
LOC110521703 LOC106584150 coding upstream 118697 30863624 ~ 30866524 (+)
si:ch211-117l17.6 NA coding upstream 124736 30858838 ~ 30860485 (+)
LOC118945898 NA coding downstream 183453 31168906 ~ 31168960 (+)
LOC110521713 LOC106584160 coding downstream 658381 31643834 ~ 31657204 (+)
LOC110521714 LOC106584162 coding downstream 677725 31663178 ~ 31685070 (+)
LOC110521715 LOC106584163 coding downstream 700602 31686055 ~ 31730932 (+)
LOC110521719 LOC106584167 coding downstream 911568 31897021 ~ 31902537 (+)
G2223087 NA non-coding upstream 1272 30983738 ~ 30983949 (+)
G2223079 NA non-coding upstream 9644 30975358 ~ 30975577 (+)
G2223075 NA non-coding upstream 11872 30973021 ~ 30973349 (+)
G2222967 NA non-coding upstream 14551 30970352 ~ 30970670 (+)
G2222931 NA non-coding upstream 15337 30968069 ~ 30969884 (+)
G2223083 NA non-coding downstream 7331 30992784 ~ 30996265 (+)
G2223093 NA non-coding downstream 15475 31000928 ~ 31001263 (+)
G2223099 NA non-coding downstream 24633 31010086 ~ 31010445 (+)
G2223150 NA non-coding downstream 45446 31030899 ~ 31031488 (+)
G2223225 NA non-coding downstream 105138 31090591 ~ 31090907 (+)
G2220253 NA other upstream 1963339 29021586 ~ 29021882 (+)
G2219991 NA other upstream 2435743 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 2437137 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 2677895 28260830 ~ 28307538 (+)
G2225948 NA other downstream 2586687 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 4196516 35181902 ~ 35190209 (+)
G2228777 NA other downstream 4532781 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 4707857 35693310 ~ 35735400 (+)
LOC110521770 igfbp-1a2 other downstream 4815579 35800643 ~ 35805071 (+)

Expression


Co-expression Network