G2223083


Basic Information

Item Value
gene id G2223083
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 30992784 ~ 30996265 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2542464
caaCATGTCTCTACTTTTTACCTGAATCCAGGATGTAGGAGTTTAGGGATTCCTCTCATGATTTTTACTTAATTATTTTGTTGTCATTATTTAGATTATAAATACCTGTGGTTGTTTGAAAGGAACCTCCAAACTTACCGACAAGTGTGACAACCCAGTCAACAAGCATGCCTATGCCCATACTATATCTGCTGTGGTAAGAACCACATGTTATAATCAGACTAAAGCAAGGAAGAGTTTTATCAACAAGGACAATTATAAGAACACTATTGGATGTGACATCCGCTCTGCATCATTGATGTGCATCTACAATATGGTCTTGGCTACTCACTTAATGACATTGTGCATGTCTATGTTTACTATCATATACTTTTACTCATAAATGTGTCAGTAAAGTATTTAACTCTTTCAAtagacattttcaacatgtccgtTCCACTGTGATGCATTCAGAATGAGATATACCAGAGGTTCCTCTGTTATCTGATTTCCCCCTATGTCTAGCAATTTCACAATATGTTTGAAGCATTTTCAACTTCACTGGTATGGTTGTAGGCTACCAGAGCATGTGATGCAGGCCATGCCAGGTCAGTTTGAATTGTTTTGCACCTTTCAATCAGTCAGAAGTATCATATTCCTGCCTTCCATTGGTGGCACACATCTAATTAATTTAGTCATATAGTGCCTATCTTTTCCATTCATTTAGGATTCAGACCTGCAGATATCTCCTCATGCTTATAGGCTGATCTACACAGCAGTTGCTGTTGAATATGGTTTCACCTCAACCTGACACCACTTTTTTGTTGCATGGAATTATCTGACAAACTTAGATTTGCGGTAAACTTTATTTAAGTTGACATTTCATTCAACCAATGGGGAAAAAAATGCTACCATCTGAAATGCTACAGTGTTCAGTCTCGACTTGTTAAAAGATTATGAATGTTAAGGTATGACAATTGTAACTCAATAAAGGAGTTGCGTTGACTTGCACAGTAAACCAATTGTTGCCCGTCTTGCATGGATTTGATGACAAGCTCATGGGATCATCAGTTGTAGATTGCGCTTGCAAGGTATAGATTTTAATTATTTGAACCCCAAAATTAAAGTGTATCACTTTGGTCTCAGAAACTATGACAATGTGGACCATCAAAATATTAGAATGATCAAATAAAAGCATGCACATATTTGATGCATTATTGATAGACTACAATACATGTTAAGAGTGTTAATATATcacaaatggattaaattattccCATTTCCAAATGATGACTATTTTCTCTCCATGATTgtttagatttttggggggtagAAATTTGTGTTTCTTATTTTATATTCATTTCTATATAATTTAGTTTTTAGCATGTTAGAAGAACATGTTTTTAGCATTGTAAAAGTCATGAGAATAGTGTGTAGAAAGACTGTCTAACCAAAAGATTACTATGAGGGATGCGTGTGATTCACTGTAGTAATGTGCCCTCACCACCATTTCTAGTCAAAGCATGATTTCTGACTGATAATGctctttgtgtgcgtgtgtggcagGGAATTATTATGTAAGTTCCAATATAAATTAAATTGACCTTGTTTTGTAAACAACAAATAATAAGGGGGTCTCATATGAAGCCGTTGtccttttgtttttgtttagtaCGGTATAACgttacttttaaaaaatgtagtatTTCCACAGTTTCTAAATAACAAGAACAACAtgattttcatatttttttgttattctttttaACGTTTCAATAGAATATTTTGTATTTTAACCATCTGATATTCTAATGTTTCTCTTCTATATCTACTAAACTAACACAAGCTAAATTTGAGTCGTACATACAGAGGCAATAAAGAGCCTTGGATTTCTTGACATTTTGTGTtataaagtgggattaaaatggatttaattgtcatttttttggtcTACGATCTACACAAactactctaatgtcaaagtggaagagaaaTTATAACATTTTTTAAgatgaatgaaaaataaaacataaatgaGTCAATagatgttagaaacacctttggccgCAATTACAGCTATGAATCTTATTGGGTAAGTCTCAtcagagctttgcacacctggattgtgcaatttattctctctattattattatcATGGCTAGACAGCGATTTTCAAATCTTCCCTATGTGTTCAAGCAGATTGAACTAAATACTCCAGCGTAGATCTGgctttgtgttgtaggttattgtcctactggaaggtgaaTTCCtcccccagtgtctggtgtaaagcagactgaatcaggttttcctttaggattttgcctgtgcttagttccatcctatttcttttcatcctgaaaagGTCTTTGCTGATGTCAAGAATACCCATACCATGATCCAGCCACCATACTTGAATATAAGGAGGCAGTTacccagtgatgtgttgttggattgccccaaacataaggctttgcatttaggcagAAAAGTGTATTCCTTTTCTGTTGAATTTTTTCTTTGCAGTATGGCTTTAGTGCCTttttgcatgttttggaataattgTTATTCTTTATATTTGGATTCTTCTTTTCAcgctgtcatttaggtcattattgaggagtcactacaatgttgttgatccatcctcagttctcccatcacagccattttACTCTGTAGGTTTTTCTAAATCaacaatggcctcatggtgacatccctaagcagtgtccttcctgtcctgcagctcagttcagaaggacaactatctttgatgtgtctgggtggtttatcATCCACAGCATatttattaacttgaccatggtTAAAGATGTACTCAACATTAGATGGTTTATtgatacccatctaccaatcaccgCTCTTCTTTATGGGGCTTtagaaaagctccctggtctttgcagTTTAATCTGCACTTGACATTCAATACtttactgagggaccttacatatgttGTATGTAtaggagacagaggaaggggtagtcatttaaaaattgTCAACCCCTAACATTTCACACAGTGAGTTCATGTAatttgtgatttgttaagccaaatttGACTTCTGAACTAATTTTGGCTTGCCTAAAAAAAgtaatgaatacttttgcaacaactatattttagttgataaattattattttgtaaACATTTTAGAATTTctttttcactttgacattatggagtattttgtatagatcaatgacaaaaatgtacaattaaatatatttcagtcccactttgtaacaacaaaatgtgaagtTCAAGGCGGtgtagactttctataggcacAGTACTTCCTTCCTGACAGACCATCCCAGGTTATGCATTAACAAATCCTATTTGTGTTGACAACTGTACATTGTGGATTATTGTTATTATACAAACCACACTGTTTACTTAACAATGATTTATGCTATTAGGATGGTTGATACCAGTGATCCCTGCAGCACTTTCAAACAACTCCTGATCAAATTCCTCGGTTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2542464 True 3482 lncRNA 0.35 1 30992784 30996265

Neighbor

gene id symbol gene type direction distance location
LOC110521708 LOC106584155 coding upstream 3223 30978905 ~ 30989561 (+)
LOC110521707 LOC106584154 coding upstream 25004 30935455 ~ 30967780 (+)
LOC110521706 NA coding upstream 66391 30921893 ~ 30926393 (+)
rgs2 LOC106584094 coding upstream 111829 30878686 ~ 30880955 (+)
LOC110521703 LOC106584150 coding upstream 126260 30863624 ~ 30866524 (+)
LOC118945898 NA coding downstream 172641 31168906 ~ 31168960 (+)
LOC110521713 LOC106584160 coding downstream 647569 31643834 ~ 31657204 (+)
LOC110521714 LOC106584162 coding downstream 666913 31663178 ~ 31685070 (+)
LOC110521715 LOC106584163 coding downstream 689790 31686055 ~ 31730932 (+)
LOC110521719 LOC106584167 coding downstream 900756 31897021 ~ 31902537 (+)
G2223089 NA non-coding upstream 7331 30985221 ~ 30985453 (+)
G2223087 NA non-coding upstream 8835 30983738 ~ 30983949 (+)
G2223079 NA non-coding upstream 17207 30975358 ~ 30975577 (+)
G2223075 NA non-coding upstream 19435 30973021 ~ 30973349 (+)
G2222967 NA non-coding upstream 22114 30970352 ~ 30970670 (+)
G2223093 NA non-coding downstream 4663 31000928 ~ 31001263 (+)
G2223099 NA non-coding downstream 13821 31010086 ~ 31010445 (+)
G2223150 NA non-coding downstream 34634 31030899 ~ 31031488 (+)
G2223225 NA non-coding downstream 94326 31090591 ~ 31090907 (+)
G2223233 NA non-coding downstream 99778 31096043 ~ 31096294 (+)
G2220253 NA other upstream 1970902 29021586 ~ 29021882 (+)
G2219991 NA other upstream 2443306 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 2444700 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 2685458 28260830 ~ 28307538 (+)
G2225948 NA other downstream 2575875 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 4185704 35181902 ~ 35190209 (+)
G2228777 NA other downstream 4521969 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 4697045 35693310 ~ 35735400 (+)
LOC110521770 igfbp-1a2 other downstream 4804767 35800643 ~ 35805071 (+)

Expression


Co-expression Network