G2223150


Basic Information

Item Value
gene id G2223150
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 31030899 ~ 31031488 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2542531
ggcaacagagaacacaggtacaaATGTGAAGGTgttaatggggaagatgggcgacacctggaggggggtggagacaatcacaaagacagttgaaacagatcagggtctgacacaggatgaatgttttggaatatttgtattctgtacaggctttcttcttttcactctgtcatttaggttagtattgtggagtaactacaatgttgttgatccatcctcagttttctcctatcacagccattaaactctgtaactgttttaaagtcaccattggcctcatggtgaaatccctgaacggtttccttcctctccggcagctgagttagaaaggatgcctgtatctttgtagtgactgggtgtattgatacaccatccaaagtgtaattaataacgtcaccatgctttaagggatattcaatgtctgcttttttattttttacccgtctaccaataggtgcccttctttgcgagactTTGGAAGACGTTCCttgtctttgtagttgaatctgtgtttgaaattcactgcttgactgagggaccttacagataattgtatgtgtggggtacagagatgaggtagtcattaaata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2542531 True 590 lncRNA 0.41 1 31030899 31031488

Neighbor

gene id symbol gene type direction distance location
LOC110521708 LOC106584155 coding upstream 41338 30978905 ~ 30989561 (+)
LOC110521707 LOC106584154 coding upstream 63119 30935455 ~ 30967780 (+)
LOC110521706 NA coding upstream 104506 30921893 ~ 30926393 (+)
rgs2 LOC106584094 coding upstream 149944 30878686 ~ 30880955 (+)
LOC110521703 LOC106584150 coding upstream 164375 30863624 ~ 30866524 (+)
LOC118945898 NA coding downstream 137418 31168906 ~ 31168960 (+)
LOC110521713 LOC106584160 coding downstream 612346 31643834 ~ 31657204 (+)
LOC110521714 LOC106584162 coding downstream 631690 31663178 ~ 31685070 (+)
LOC110521715 LOC106584163 coding downstream 654567 31686055 ~ 31730932 (+)
LOC110521719 LOC106584167 coding downstream 865533 31897021 ~ 31902537 (+)
G2223099 NA non-coding upstream 20454 31010086 ~ 31010445 (+)
G2223093 NA non-coding upstream 29636 31000928 ~ 31001263 (+)
G2223083 NA non-coding upstream 34634 30992784 ~ 30996265 (+)
G2223089 NA non-coding upstream 45446 30985221 ~ 30985453 (+)
G2223087 NA non-coding upstream 46950 30983738 ~ 30983949 (+)
G2223225 NA non-coding downstream 59103 31090591 ~ 31090907 (+)
G2223233 NA non-coding downstream 64555 31096043 ~ 31096294 (+)
G2223240 NA non-coding downstream 68236 31099724 ~ 31099969 (+)
G2223258 NA non-coding downstream 80186 31111674 ~ 31111877 (+)
G2223262 NA non-coding downstream 83856 31115344 ~ 31115583 (+)
G2220253 NA other upstream 2009017 29021586 ~ 29021882 (+)
G2219991 NA other upstream 2481421 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 2482815 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 2723573 28260830 ~ 28307538 (+)
G2225948 NA other downstream 2540652 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 4150481 35181902 ~ 35190209 (+)
G2228777 NA other downstream 4486746 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 4661822 35693310 ~ 35735400 (+)
LOC110521770 igfbp-1a2 other downstream 4769544 35800643 ~ 35805071 (+)

Expression


Co-expression Network