G2223225


Basic Information

Item Value
gene id G2223225
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 31090591 ~ 31090907 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2542606
GCTTAACTCTGTAAACACGCTGGATGATTTAGAATCCATTGAAGAGCTTGAACGATTCATTGACGAGAGATACTTACGAACTCAAAGAAACATGTTGCTGGTTTCGGAGGATTCAAGCATTGTCAAGGACAACCAACCAAAtctacaaaacaaaacaaaaccagGTTGGCCAATAGGTATCAACGATGGAACCAAACCATCCCCTAGTAAGAGGGTGCGTGTGGTGAGTGGGGAGAGGTTTACTGATATGGATGTTGACTTGTTAAAATCCATTAATGAAAGGCTTGCCAAACTTGATATCTTGGATATATTACGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2542606 True 317 lncRNA 0.41 1 31090591 31090907

Neighbor

gene id symbol gene type direction distance location
LOC110521708 LOC106584155 coding upstream 101030 30978905 ~ 30989561 (+)
LOC110521707 LOC106584154 coding upstream 122811 30935455 ~ 30967780 (+)
LOC110521706 NA coding upstream 164198 30921893 ~ 30926393 (+)
rgs2 LOC106584094 coding upstream 209636 30878686 ~ 30880955 (+)
LOC110521703 LOC106584150 coding upstream 224067 30863624 ~ 30866524 (+)
LOC118945898 NA coding downstream 77999 31168906 ~ 31168960 (+)
LOC110521713 LOC106584160 coding downstream 552927 31643834 ~ 31657204 (+)
LOC110521714 LOC106584162 coding downstream 572271 31663178 ~ 31685070 (+)
LOC110521715 LOC106584163 coding downstream 595148 31686055 ~ 31730932 (+)
LOC110521719 LOC106584167 coding downstream 806114 31897021 ~ 31902537 (+)
G2223150 NA non-coding upstream 59103 31030899 ~ 31031488 (+)
G2223099 NA non-coding upstream 80146 31010086 ~ 31010445 (+)
G2223093 NA non-coding upstream 89328 31000928 ~ 31001263 (+)
G2223083 NA non-coding upstream 94326 30992784 ~ 30996265 (+)
G2223089 NA non-coding upstream 105138 30985221 ~ 30985453 (+)
G2223233 NA non-coding downstream 5136 31096043 ~ 31096294 (+)
G2223240 NA non-coding downstream 8817 31099724 ~ 31099969 (+)
G2223258 NA non-coding downstream 20767 31111674 ~ 31111877 (+)
G2223262 NA non-coding downstream 24437 31115344 ~ 31115583 (+)
G2223263 NA non-coding downstream 25286 31116193 ~ 31116412 (+)
G2220253 NA other upstream 2068709 29021586 ~ 29021882 (+)
G2219991 NA other upstream 2541113 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 2542507 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 2783265 28260830 ~ 28307538 (+)
G2225948 NA other downstream 2481233 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 4091062 35181902 ~ 35190209 (+)
G2228777 NA other downstream 4427327 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 4602403 35693310 ~ 35735400 (+)
LOC110521770 igfbp-1a2 other downstream 4710125 35800643 ~ 35805071 (+)

Expression


Co-expression Network