Gene
RNA
| Item | Value |
|---|---|
| gene id | G2227124 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 34149931 ~ 34150225 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: cadherin-related family member 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2546780 | True | 295 | lncRNA | 0.53 | 1 | 34149931 | 34150225 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521744 | LOC106584192 | coding | downstream | 230128 | 33835382 ~ 33919803 (-) |
| LOC110521743 | LOC106584191 | coding | downstream | 421543 | 33721919 ~ 33728388 (-) |
| LOC110521741 | LOC106584188 | coding | downstream | 439041 | 33686041 ~ 33710890 (-) |
| lrrc41 | LOC106584186 | coding | downstream | 501004 | 33641220 ~ 33648927 (-) |
| LOC110521732 | LOC106584180 | coding | downstream | 1658769 | 32488240 ~ 32491162 (-) |
| LOC110521745 | LOC106584194 | coding | upstream | 179137 | 34329362 ~ 34379734 (-) |
| LOC110521746 | LOC106584195 | coding | upstream | 248091 | 34398316 ~ 34483575 (-) |
| LOC110521753 | LOC106584200 | coding | upstream | 592709 | 34742934 ~ 34758146 (-) |
| LOC110521756 | LOC106584201 | coding | upstream | 1016662 | 35166887 ~ 35169270 (-) |
| LOC110521758 | LOC106584076 | coding | upstream | 1047585 | 35197810 ~ 35205192 (-) |
| G2227118 | NA | non-coding | downstream | 5797 | 34143921 ~ 34144134 (-) |
| G2227113 | NA | non-coding | downstream | 8762 | 34140658 ~ 34141169 (-) |
| G2227112 | NA | non-coding | downstream | 11191 | 34138521 ~ 34138740 (-) |
| G2227019 | NA | non-coding | downstream | 79119 | 34070573 ~ 34070812 (-) |
| G2227007 | NA | non-coding | downstream | 85758 | 34063955 ~ 34064173 (-) |
| G2227511 | NA | non-coding | upstream | 242063 | 34392288 ~ 34392500 (-) |
| G2227412 | NA | non-coding | upstream | 242750 | 34392975 ~ 34394121 (-) |
| G2227557 | NA | non-coding | upstream | 360021 | 34510246 ~ 34511985 (-) |
| G2227794 | NA | non-coding | upstream | 378274 | 34528499 ~ 34635183 (-) |
| G2227867 | NA | non-coding | upstream | 531207 | 34681432 ~ 34685403 (-) |
| G2226745 | NA | other | downstream | 340037 | 33809379 ~ 33809894 (-) |
| G2226519 | NA | other | downstream | 520037 | 33629122 ~ 33629894 (-) |
| G2224948 | NA | other | downstream | 1727884 | 32421732 ~ 32422047 (-) |
| G2223487 | NA | other | downstream | 2874788 | 31274720 ~ 31275143 (-) |
| G2227478 | NA | other | upstream | 160917 | 34311142 ~ 34323655 (-) |
| G2227801 | NA | other | upstream | 391992 | 34542217 ~ 34542619 (-) |
| G2229175 | NA | other | upstream | 1648579 | 35798804 ~ 35799357 (-) |
| G2229647 | NA | other | upstream | 2062921 | 36213146 ~ 36214385 (-) |
| LOC110521777 | LOC106584061 | other | upstream | 2370127 | 36520352 ~ 36541228 (-) |
