Gene
RNA
| Item | Value |
|---|---|
| gene id | G2227952 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 34765226 ~ 34765454 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2547661 | True | 229 | lncRNA | 0.38 | 1 | 34765226 | 34765454 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521753 | LOC106584200 | coding | downstream | 7080 | 34742934 ~ 34758146 (-) |
| LOC110521746 | LOC106584195 | coding | downstream | 281651 | 34398316 ~ 34483575 (-) |
| LOC110521745 | LOC106584194 | coding | downstream | 385492 | 34329362 ~ 34379734 (-) |
| LOC110521744 | LOC106584192 | coding | downstream | 845423 | 33835382 ~ 33919803 (-) |
| LOC110521743 | LOC106584191 | coding | downstream | 1036838 | 33721919 ~ 33728388 (-) |
| LOC110521756 | LOC106584201 | coding | upstream | 401433 | 35166887 ~ 35169270 (-) |
| LOC110521758 | LOC106584076 | coding | upstream | 432356 | 35197810 ~ 35205192 (-) |
| LOC110521759 | LOC106584097 | coding | upstream | 451254 | 35216708 ~ 35219689 (-) |
| irf4l | irf4 | coding | upstream | 728500 | 35493954 ~ 35500738 (-) |
| LOC110521763 | LOC106584075 | coding | upstream | 734534 | 35499988 ~ 35514392 (-) |
| G2227947 | NA | non-coding | downstream | 4704 | 34760231 ~ 34760522 (-) |
| G2227897 | LOC106584198 | non-coding | downstream | 27754 | 34731651 ~ 34737472 (-) |
| G2227915 | NA | non-coding | downstream | 56293 | 34708698 ~ 34708933 (-) |
| G2227914 | NA | non-coding | downstream | 56861 | 34708141 ~ 34708365 (-) |
| G2227898 | NA | non-coding | downstream | 57859 | 34705264 ~ 34707367 (-) |
| G2227955 | NA | non-coding | upstream | 3084 | 34768538 ~ 34768781 (-) |
| G2228207 | NA | non-coding | upstream | 233034 | 34998488 ~ 34998730 (-) |
| G2228255 | NA | non-coding | upstream | 268635 | 35034089 ~ 35036399 (-) |
| G2228280 | NA | non-coding | upstream | 315693 | 35081147 ~ 35081371 (-) |
| G2228283 | NA | non-coding | upstream | 316646 | 35082100 ~ 35082503 (-) |
| G2227801 | NA | other | downstream | 222607 | 34542217 ~ 34542619 (-) |
| G2227478 | NA | other | downstream | 441571 | 34311142 ~ 34323655 (-) |
| G2226745 | NA | other | downstream | 955332 | 33809379 ~ 33809894 (-) |
| LOC110521741 | LOC106584188 | other | downstream | 1062783 | 33686041 ~ 33710890 (-) |
| G2226519 | NA | other | downstream | 1135332 | 33629122 ~ 33629894 (-) |
| G2229175 | NA | other | upstream | 1033350 | 35798804 ~ 35799357 (-) |
| G2229647 | NA | other | upstream | 1447692 | 36213146 ~ 36214385 (-) |
| LOC110521777 | LOC106584061 | other | upstream | 1754898 | 36520352 ~ 36541228 (-) |
| LOC110521791 | LOC106584041 | other | upstream | 2735756 | 37498832 ~ 37523064 (-) |
| G2232820 | NA | other | upstream | 3999968 | 38765422 ~ 38767903 (-) |
