Gene
RNA
| Item | Value |
|---|---|
| gene id | G2228422 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 35192424 ~ 35192636 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2548156 | True | 213 | lncRNA | 0.39 | 1 | 35192424 | 35192636 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521756 | LOC106584201 | coding | downstream | 23154 | 35166887 ~ 35169270 (-) |
| LOC110521753 | LOC106584200 | coding | downstream | 434278 | 34742934 ~ 34758146 (-) |
| LOC110521746 | LOC106584195 | coding | downstream | 708849 | 34398316 ~ 34483575 (-) |
| LOC110521745 | LOC106584194 | coding | downstream | 812690 | 34329362 ~ 34379734 (-) |
| LOC110521744 | LOC106584192 | coding | downstream | 1272621 | 33835382 ~ 33919803 (-) |
| LOC110521758 | LOC106584076 | coding | upstream | 5174 | 35197810 ~ 35205192 (-) |
| LOC110521759 | LOC106584097 | coding | upstream | 24072 | 35216708 ~ 35219689 (-) |
| irf4l | irf4 | coding | upstream | 301318 | 35493954 ~ 35500738 (-) |
| LOC110521763 | LOC106584075 | coding | upstream | 307352 | 35499988 ~ 35514392 (-) |
| LOC110520993 | LOC106584074 | coding | upstream | 352940 | 35545576 ~ 35577047 (-) |
| G2228421 | NA | non-coding | downstream | 231 | 35191957 ~ 35192193 (-) |
| G2228417 | NA | non-coding | downstream | 2839 | 35188643 ~ 35189585 (-) |
| G2228407 | NA | non-coding | downstream | 19201 | 35173009 ~ 35173223 (-) |
| G2228410 | NA | non-coding | downstream | 19543 | 35172589 ~ 35172881 (-) |
| G2228283 | NA | non-coding | downstream | 109921 | 35082100 ~ 35082503 (-) |
| G2228432 | NA | non-coding | upstream | 20341 | 35212977 ~ 35213208 (-) |
| G2228480 | NA | non-coding | upstream | 69030 | 35261666 ~ 35261896 (-) |
| G2228501 | NA | non-coding | upstream | 82255 | 35274891 ~ 35275139 (-) |
| G2228608 | NA | non-coding | upstream | 152222 | 35344858 ~ 35345128 (-) |
| G2228611 | NA | non-coding | upstream | 153411 | 35346047 ~ 35346268 (-) |
| G2227801 | NA | other | downstream | 649805 | 34542217 ~ 34542619 (-) |
| G2227478 | NA | other | downstream | 868769 | 34311142 ~ 34323655 (-) |
| G2226745 | NA | other | downstream | 1382530 | 33809379 ~ 33809894 (-) |
| LOC110521741 | LOC106584188 | other | downstream | 1489981 | 33686041 ~ 33710890 (-) |
| G2226519 | NA | other | downstream | 1562530 | 33629122 ~ 33629894 (-) |
| G2229175 | NA | other | upstream | 606168 | 35798804 ~ 35799357 (-) |
| G2229647 | NA | other | upstream | 1020510 | 36213146 ~ 36214385 (-) |
| LOC110521777 | LOC106584061 | other | upstream | 1327716 | 36520352 ~ 36541228 (-) |
| LOC110521791 | LOC106584041 | other | upstream | 2308574 | 37498832 ~ 37523064 (-) |
| G2232820 | NA | other | upstream | 3572786 | 38765422 ~ 38767903 (-) |
