G2228502


Basic Information

Item Value
gene id G2228502
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 35276309 ~ 35276545 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2548240
ccccaggactacctgacatgatgactccttgctgtccccagtccacctggccgtgctgctgctccagtttcaactgttctgccttattattattcgaccatgctggtcatttatgcacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccaccccacatagcctggttcctctttaggtttcttcctaggttttggcctttctag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2548240 True 237 lncRNA 0.50 1 35276309 35276545

Neighbor

gene id symbol gene type direction distance location
LOC110521757 NA coding upstream 86100 35181902 ~ 35190209 (+)
LOC118945793 NA coding upstream 159551 34960599 ~ 35116758 (+)
LOC110521755 NA coding upstream 343672 34927630 ~ 34932637 (+)
LOC110521751 LOC106584199 coding upstream 440036 34776810 ~ 34836273 (+)
LOC110521754 NA coding upstream 529409 34743576 ~ 34746900 (+)
LOC110521760 LOC100380722 coding downstream 129024 35405569 ~ 35492375 (+)
psmg4 psmg4 coding downstream 266962 35543507 ~ 35545435 (+)
wu:fi04e12 LOC106584072 coding downstream 305728 35582273 ~ 35618259 (+)
tbc1d7 tbc1d7 coding downstream 343374 35619919 ~ 35634039 (+)
LOC110521768 sirt5 coding downstream 447351 35693310 ~ 35735400 (+)
G2228488 NA non-coding upstream 7494 35268538 ~ 35268815 (+)
G2228447 NA non-coding upstream 24831 35240437 ~ 35251478 (+)
G2228442 NA non-coding upstream 40021 35235960 ~ 35236288 (+)
G2228379 NA non-coding upstream 54571 35221471 ~ 35221738 (+)
G2228375 NA non-coding upstream 60231 35215708 ~ 35216078 (+)
G2228545 NA non-coding downstream 52349 35328894 ~ 35331440 (+)
G2228552 NA non-coding downstream 63537 35340082 ~ 35340312 (+)
G2228618 NA non-coding downstream 74362 35350907 ~ 35351262 (+)
G2228630 NA non-coding downstream 84690 35361235 ~ 35361470 (+)
G2228635 LOC107756720 non-coding downstream 90437 35366982 ~ 35367318 (+)
G2225948 NA other upstream 1671415 33572140 ~ 33604894 (+)
LOC110521703 LOC106584150 other upstream 4409787 30863624 ~ 30866524 (+)
G2220253 NA other upstream 6254427 29021586 ~ 29021882 (+)
G2219991 NA other upstream 6726831 28549029 ~ 28549478 (+)
G2228777 NA other downstream 241689 35518234 ~ 35519242 (+)
LOC110521770 igfbp-1a2 other downstream 524487 35800643 ~ 35805071 (+)
insl5a rel3 other downstream 2308481 37584989 ~ 37587002 (+)
G2231371 NA other downstream 3046815 38315783 ~ 38336981 (+)

Expression


Co-expression Network