Gene
RNA
| Item | Value |
|---|---|
| gene id | G2228608 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 35344858 ~ 35345128 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2548348 | True | 271 | lncRNA | 0.29 | 1 | 35344858 | 35345128 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521759 | LOC106584097 | coding | downstream | 125169 | 35216708 ~ 35219689 (-) |
| LOC110521758 | LOC106584076 | coding | downstream | 139666 | 35197810 ~ 35205192 (-) |
| LOC110521756 | LOC106584201 | coding | downstream | 175588 | 35166887 ~ 35169270 (-) |
| LOC110521753 | LOC106584200 | coding | downstream | 586712 | 34742934 ~ 34758146 (-) |
| LOC110521746 | LOC106584195 | coding | downstream | 861283 | 34398316 ~ 34483575 (-) |
| irf4l | irf4 | coding | upstream | 148826 | 35493954 ~ 35500738 (-) |
| LOC110521763 | LOC106584075 | coding | upstream | 154860 | 35499988 ~ 35514392 (-) |
| LOC110520993 | LOC106584074 | coding | upstream | 200448 | 35545576 ~ 35577047 (-) |
| phactr1 | LOC106584070 | coding | upstream | 297269 | 35642397 ~ 35717855 (-) |
| LOC110521771 | igfbp-3a2 | coding | upstream | 465440 | 35810568 ~ 35873392 (-) |
| G2228501 | NA | non-coding | downstream | 69719 | 35274891 ~ 35275139 (-) |
| G2228480 | NA | non-coding | downstream | 82962 | 35261666 ~ 35261896 (-) |
| G2228432 | NA | non-coding | downstream | 131650 | 35212977 ~ 35213208 (-) |
| G2228422 | NA | non-coding | downstream | 152222 | 35192424 ~ 35192636 (-) |
| G2228421 | NA | non-coding | downstream | 152665 | 35191957 ~ 35192193 (-) |
| G2228611 | NA | non-coding | upstream | 919 | 35346047 ~ 35346268 (-) |
| G2228613 | NA | non-coding | upstream | 1886 | 35347014 ~ 35347311 (-) |
| G2228625 | NA | non-coding | upstream | 13839 | 35358967 ~ 35359234 (-) |
| G2228626 | NA | non-coding | upstream | 14374 | 35359502 ~ 35359714 (-) |
| G2228631 | NA | non-coding | upstream | 16228 | 35361356 ~ 35361571 (-) |
| G2227801 | NA | other | downstream | 802239 | 34542217 ~ 34542619 (-) |
| G2227478 | NA | other | downstream | 1021203 | 34311142 ~ 34323655 (-) |
| G2226745 | NA | other | downstream | 1534964 | 33809379 ~ 33809894 (-) |
| LOC110521741 | LOC106584188 | other | downstream | 1642415 | 33686041 ~ 33710890 (-) |
| G2226519 | NA | other | downstream | 1714964 | 33629122 ~ 33629894 (-) |
| G2229175 | NA | other | upstream | 453676 | 35798804 ~ 35799357 (-) |
| G2229647 | NA | other | upstream | 868018 | 36213146 ~ 36214385 (-) |
| LOC110521777 | LOC106584061 | other | upstream | 1175224 | 36520352 ~ 36541228 (-) |
| LOC110521791 | LOC106584041 | other | upstream | 2156082 | 37498832 ~ 37523064 (-) |
| G2232820 | NA | other | upstream | 3420294 | 38765422 ~ 38767903 (-) |
