G2228777


Basic Information

Item Value
gene id G2228777
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 35518234 ~ 35519242 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2548536
gaacacatttggaatcatgcagtaaccaaaaaagtgttaaacaaattcaaatatattttagattcttcaaagtagccaccctttgccttgatgacagctttgcacacgcttggcattctctcaaccagcttcacctggaatgcttttccaacagtcttgaaggagttcccacatatgctgagcacttgttggctgcttttccttcactctgctgtccgactcatcccaaaccatctcaatttggttgaggtcgggggattgtggaggccaggtcatctgatgcagcactccatcactgtcctCCTTTGtaaaatagccattacacagcctggaggtatgttgggtcattgtcttgttgaaaaacaaatgatagtcccactaagcccaaaacagatgggatggcgtatcgctgcagaatgtggtagccatgctggctaagcgtgccttgaattctaaataaatcccagacagtgtcactagcaaagcccaaccacaccatcacacctcctcctccatgcttaacggtgggaaatacacatgtggagattatccgttcacccacaccatgtctcacaaagacacaacggttggaaccaaaaaatctcaaatttggactccagactaaaggacagatttccaccagtctcgTGACCCttgttcatgtttcttggcccacgcAAGTCTATtcatattattggtgtcctttagtagtggattctttgcaccaattcgaccatgaaggcctgattcacacagtctgctctgaacagttgatgttgagatgtgtctgttacttgaactctgtgaatcatttatttgggctgcaatttctgaggttggtaactctaatgaacatataatctgcagcagaggtaactctgggtcttccattccttaggcggtcctcatgagagccagtttcatcatagcacttgaagaaacgttcagtTTTTGAAATGTCTGTATTGACTGACCCTCATGTCTTAacataatgatggactgttgtttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2548536 True 1009 TUCP 0.44 1 35518234 35519242

Neighbor

gene id symbol gene type direction distance location
LOC110521760 LOC100380722 coding upstream 25859 35405569 ~ 35492375 (+)
LOC110521757 NA coding upstream 328025 35181902 ~ 35190209 (+)
LOC118945793 NA coding upstream 401476 34960599 ~ 35116758 (+)
LOC110521755 NA coding upstream 585597 34927630 ~ 34932637 (+)
LOC110521751 LOC106584199 coding upstream 681961 34776810 ~ 34836273 (+)
psmg4 psmg4 coding downstream 24265 35543507 ~ 35545435 (+)
wu:fi04e12 LOC106584072 coding downstream 63031 35582273 ~ 35618259 (+)
tbc1d7 tbc1d7 coding downstream 100677 35619919 ~ 35634039 (+)
LOC110521768 sirt5 coding downstream 204654 35693310 ~ 35735400 (+)
LOC110521770 igfbp-1a2 coding downstream 281401 35800643 ~ 35805071 (+)
G2228660 NA non-coding upstream 41478 35473033 ~ 35476756 (+)
G2228636 NA non-coding upstream 149762 35368122 ~ 35368472 (+)
G2228635 LOC107756720 non-coding upstream 150916 35366982 ~ 35367318 (+)
G2228630 NA non-coding upstream 156764 35361235 ~ 35361470 (+)
G2228618 NA non-coding upstream 166972 35350907 ~ 35351262 (+)
G2228782 NA non-coding downstream 6241 35525483 ~ 35525695 (+)
G2228785 NA non-coding downstream 11627 35530869 ~ 35531082 (+)
G2228825 LOC105030512 non-coding downstream 86616 35605858 ~ 35606235 (+)
G2228814 NA non-coding downstream 115715 35634957 ~ 35635306 (+)
G2225948 NA other upstream 1913340 33572140 ~ 33604894 (+)
LOC110521703 LOC106584150 other upstream 4651712 30863624 ~ 30866524 (+)
G2220253 NA other upstream 6496352 29021586 ~ 29021882 (+)
G2219991 NA other upstream 6968756 28549029 ~ 28549478 (+)
insl5a rel3 other downstream 2065784 37584989 ~ 37587002 (+)
G2231371 NA other downstream 2804118 38315783 ~ 38336981 (+)
G2232661 LOC105030512 other downstream 3271073 38790315 ~ 38790675 (+)

Expression


Co-expression Network