Gene
RNA
| Item | Value |
|---|---|
| gene id | G2229046 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 35601053 ~ 35601265 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| desmoplakin-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2548817 | True | 213 | lncRNA | 0.54 | 1 | 35601053 | 35601265 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520993 | LOC106584074 | coding | downstream | 24006 | 35545576 ~ 35577047 (-) |
| LOC110521763 | LOC106584075 | coding | downstream | 86661 | 35499988 ~ 35514392 (-) |
| irf4l | irf4 | coding | downstream | 100315 | 35493954 ~ 35500738 (-) |
| LOC110521759 | LOC106584097 | coding | downstream | 381364 | 35216708 ~ 35219689 (-) |
| LOC110521758 | LOC106584076 | coding | downstream | 395861 | 35197810 ~ 35205192 (-) |
| phactr1 | LOC106584070 | coding | upstream | 41132 | 35642397 ~ 35717855 (-) |
| LOC110521771 | igfbp-3a2 | coding | upstream | 209303 | 35810568 ~ 35873392 (-) |
| LOC110521773 | LOC106584067 | coding | upstream | 299210 | 35900475 ~ 35966970 (-) |
| LOC118945798 | NA | coding | upstream | 317646 | 35918911 ~ 35920667 (-) |
| LOC110521774 | LOC106584064 | coding | upstream | 669847 | 36271112 ~ 36275588 (-) |
| G2229045 | NA | non-coding | downstream | 466 | 35600199 ~ 35600587 (-) |
| G2229044 | NA | non-coding | downstream | 1260 | 35599495 ~ 35599793 (-) |
| G2229041 | NA | non-coding | downstream | 9849 | 35590972 ~ 35591204 (-) |
| G2229040 | NA | non-coding | downstream | 11603 | 35589172 ~ 35589450 (-) |
| G2228993 | psmg4 | non-coding | downstream | 55620 | 35543572 ~ 35545433 (-) |
| G2229047 | NA | non-coding | upstream | 131 | 35601396 ~ 35601657 (-) |
| G2229048 | NA | non-coding | upstream | 2987 | 35604252 ~ 35604508 (-) |
| G2229051 | LOC106584072 | non-coding | upstream | 9747 | 35611012 ~ 35612791 (-) |
| G2229052 | NA | non-coding | upstream | 12676 | 35613941 ~ 35614177 (-) |
| G2229065 | NA | non-coding | upstream | 30172 | 35631437 ~ 35633769 (-) |
| G2227801 | NA | other | downstream | 1058434 | 34542217 ~ 34542619 (-) |
| G2227478 | NA | other | downstream | 1277398 | 34311142 ~ 34323655 (-) |
| G2226745 | NA | other | downstream | 1791159 | 33809379 ~ 33809894 (-) |
| LOC110521741 | LOC106584188 | other | downstream | 1898610 | 33686041 ~ 33710890 (-) |
| G2226519 | NA | other | downstream | 1971159 | 33629122 ~ 33629894 (-) |
| G2229175 | NA | other | upstream | 197539 | 35798804 ~ 35799357 (-) |
| G2229647 | NA | other | upstream | 611881 | 36213146 ~ 36214385 (-) |
| LOC110521777 | LOC106584061 | other | upstream | 919087 | 36520352 ~ 36541228 (-) |
| LOC110521791 | LOC106584041 | other | upstream | 1899945 | 37498832 ~ 37523064 (-) |
| G2232820 | NA | other | upstream | 3164157 | 38765422 ~ 38767903 (-) |
