G2229064


Basic Information

Item Value
gene id G2229064
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 35636594 ~ 35637613 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2548835
aagggggccgaatactttcgcaaggcactgtatctgctgCATCATGGGTTGTAGGTGAAGACCTTAAGGGAGGCTGCAGAAACTATCtaaaggaaacttcttggcagggaaaaaAACACATTGGAATAAATAATACGATTTAGAGTTAAATCCTTTGTTTTTGTTGGAAAGATTGTTTTACAATCATGTTTTTATTCATTGTATTTTGAATAActtgtagaaaatacactttatgacaccatcaagaagcattatgacttatgttttattttatgtttatttcatataagccagataggcctatcacatACATGCCCGTATGTCAGTCATCAGCCACAAACTGCTCCTGCATTTATCCCAGTTATCAGCAACAGAGTATTGGGGTAGGTGCATGTTTGACATCAATGTATGTGCAACTACAATGATATTTTAATATgtaacatttttgaaaatgttatttaaaacATAAACATACAGTTTACAAGcaggctatggtgtaatggatTGGTTCGCCTTGTGTGGGAGTTTGTGGGTTTTGATACttttgtaggtgtcataaccagccaaaTAAATAACGTAATATATTGCCGCATTCACATGCTAGTCAGAACTAGGAAACCAGATAGCAAATCGGACATTTCTGAGTTTCCTCATTCCGACTAGCACTTGAACGCGGCGTATGTCACAACAGATCTATCTAGATATGTCTTGACAGTGTTATATTATGACAATTTATGTCAGCTGTTACAGCAGTGGTGGGCTTGGTGTCGAAATGACCCGGAAACAAgctacaccaatgtgtcagaggaaacactatTCAACTAATGacagtcagcctgcaggtgcctggCCCggcacaaggagtcgctagagtgcgatgaacCAAATAAAGATAATCTCAGTCTCTGGACTTAAAACTAATTTAAAACatatggtttgaattgaagagggcagcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2548835 True 956 lncRNA 0.38 2 35636594 35637613

Neighbor

gene id symbol gene type direction distance location
LOC110520993 LOC106584074 coding downstream 59547 35545576 ~ 35577047 (-)
LOC110521763 LOC106584075 coding downstream 122202 35499988 ~ 35514392 (-)
irf4l irf4 coding downstream 135856 35493954 ~ 35500738 (-)
LOC110521759 LOC106584097 coding downstream 416905 35216708 ~ 35219689 (-)
LOC110521758 LOC106584076 coding downstream 431402 35197810 ~ 35205192 (-)
phactr1 LOC106584070 coding upstream 4784 35642397 ~ 35717855 (-)
LOC110521771 igfbp-3a2 coding upstream 172955 35810568 ~ 35873392 (-)
LOC110521773 LOC106584067 coding upstream 262862 35900475 ~ 35966970 (-)
LOC118945798 NA coding upstream 281298 35918911 ~ 35920667 (-)
LOC110521774 LOC106584064 coding upstream 633499 36271112 ~ 36275588 (-)
G2229066 NA non-coding downstream 1262 35634954 ~ 35635332 (-)
G2229067 NA non-coding downstream 2051 35634160 ~ 35634543 (-)
G2229065 NA non-coding downstream 2825 35631437 ~ 35633769 (-)
G2229052 NA non-coding downstream 22417 35613941 ~ 35614177 (-)
G2229051 LOC106584072 non-coding downstream 23803 35611012 ~ 35612791 (-)
G2229165 NA non-coding upstream 142386 35779999 ~ 35780405 (-)
G2229169 NA non-coding upstream 148922 35786535 ~ 35786979 (-)
G2229176 NA non-coding upstream 162503 35800116 ~ 35800471 (-)
G2229179 NA non-coding upstream 168484 35806097 ~ 35806585 (-)
G2229231 NA non-coding upstream 240794 35878407 ~ 35878653 (-)
G2227801 NA other downstream 1093975 34542217 ~ 34542619 (-)
G2227478 NA other downstream 1312939 34311142 ~ 34323655 (-)
G2226745 NA other downstream 1826700 33809379 ~ 33809894 (-)
LOC110521741 LOC106584188 other downstream 1934151 33686041 ~ 33710890 (-)
G2226519 NA other downstream 2006700 33629122 ~ 33629894 (-)
G2229175 NA other upstream 161191 35798804 ~ 35799357 (-)
G2229647 NA other upstream 575533 36213146 ~ 36214385 (-)
LOC110521777 LOC106584061 other upstream 882739 36520352 ~ 36541228 (-)
LOC110521791 LOC106584041 other upstream 1863597 37498832 ~ 37523064 (-)
G2232820 NA other upstream 3127809 38765422 ~ 38767903 (-)

Expression


Co-expression Network