Gene
RNA
| Item | Value |
|---|---|
| gene id | G2228942 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 35799127 ~ 35799518 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2548704 | True | 392 | lncRNA | 0.39 | 1 | 35799127 | 35799518 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521768 | sirt5 | coding | upstream | 64167 | 35693310 ~ 35735400 (+) |
| tbc1d7 | tbc1d7 | coding | upstream | 165088 | 35619919 ~ 35634039 (+) |
| wu:fi04e12 | LOC106584072 | coding | upstream | 180868 | 35582273 ~ 35618259 (+) |
| psmg4 | psmg4 | coding | upstream | 253692 | 35543507 ~ 35545435 (+) |
| LOC110521760 | LOC100380722 | coding | upstream | 306752 | 35405569 ~ 35492375 (+) |
| LOC110521770 | igfbp-1a2 | coding | downstream | 1125 | 35800643 ~ 35805071 (+) |
| LOC110520994 | LOC106584065 | coding | downstream | 203791 | 36003309 ~ 36062700 (+) |
| LOC110520956 | LOC106583994 | coding | downstream | 639094 | 36438612 ~ 36489124 (+) |
| LOC110521776 | LOC106584062 | coding | downstream | 703633 | 36503151 ~ 36517233 (+) |
| LOC118945799 | NA | coding | downstream | 715284 | 36514802 ~ 36516539 (+) |
| G2228932 | NA | non-coding | upstream | 19370 | 35779477 ~ 35779757 (+) |
| G2228834 | NA | non-coding | upstream | 155251 | 35641442 ~ 35643876 (+) |
| G2228833 | NA | non-coding | upstream | 160648 | 35638023 ~ 35638479 (+) |
| G2228812 | NA | non-coding | upstream | 161936 | 35635563 ~ 35637191 (+) |
| G2228814 | NA | non-coding | upstream | 163821 | 35634957 ~ 35635306 (+) |
| G2228968 | NA | non-coding | downstream | 45265 | 35844783 ~ 35846275 (+) |
| G2229262 | NA | non-coding | downstream | 100980 | 35900498 ~ 35902779 (+) |
| G2229268 | NA | non-coding | downstream | 110587 | 35910105 ~ 35910623 (+) |
| G2229270 | NA | non-coding | downstream | 113030 | 35912548 ~ 35912774 (+) |
| G2229355 | NA | non-coding | downstream | 171518 | 35971036 ~ 35971255 (+) |
| G2228777 | NA | other | upstream | 279885 | 35518234 ~ 35519242 (+) |
| LOC110521757 | NA | other | upstream | 608976 | 35181902 ~ 35190209 (+) |
| G2225948 | NA | other | upstream | 2194233 | 33572140 ~ 33604894 (+) |
| LOC110521703 | LOC106584150 | other | upstream | 4932605 | 30863624 ~ 30866524 (+) |
| insl5a | rel3 | other | downstream | 1785508 | 37584989 ~ 37587002 (+) |
| G2231371 | NA | other | downstream | 2523842 | 38315783 ~ 38336981 (+) |
| G2232661 | LOC105030512 | other | downstream | 2990797 | 38790315 ~ 38790675 (+) |
| G2232855 | LOC100380853 | other | downstream | 3013132 | 38812650 ~ 38813379 (+) |
