Gene
RNA
| Item | Value |
|---|---|
| gene id | G2229231 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 35878407 ~ 35878653 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transposase, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2549022 | True | 247 | lncRNA | 0.47 | 1 | 35878407 | 35878653 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521771 | igfbp-3a2 | coding | downstream | 5015 | 35810568 ~ 35873392 (-) |
| phactr1 | LOC106584070 | coding | downstream | 160552 | 35642397 ~ 35717855 (-) |
| LOC110520993 | LOC106584074 | coding | downstream | 301360 | 35545576 ~ 35577047 (-) |
| LOC110521763 | LOC106584075 | coding | downstream | 364015 | 35499988 ~ 35514392 (-) |
| irf4l | irf4 | coding | downstream | 377669 | 35493954 ~ 35500738 (-) |
| LOC110521773 | LOC106584067 | coding | upstream | 21822 | 35900475 ~ 35966970 (-) |
| LOC118945798 | NA | coding | upstream | 40258 | 35918911 ~ 35920667 (-) |
| LOC110521774 | LOC106584064 | coding | upstream | 392459 | 36271112 ~ 36275588 (-) |
| zc3h3 | LOC106584063 | coding | upstream | 406193 | 36284846 ~ 36368490 (-) |
| LOC110521777 | LOC106584061 | coding | upstream | 644806 | 36520352 ~ 36541228 (-) |
| G2229179 | NA | non-coding | downstream | 71822 | 35806097 ~ 35806585 (-) |
| G2229176 | NA | non-coding | downstream | 77936 | 35800116 ~ 35800471 (-) |
| G2229169 | NA | non-coding | downstream | 91428 | 35786535 ~ 35786979 (-) |
| G2229165 | NA | non-coding | downstream | 98002 | 35779999 ~ 35780405 (-) |
| G2229064 | NA | non-coding | downstream | 240794 | 35636594 ~ 35637613 (-) |
| G2229354 | NA | non-coding | upstream | 92112 | 35970765 ~ 35971011 (-) |
| G2229366 | NA | non-coding | upstream | 100342 | 35978995 ~ 35979398 (-) |
| G2229377 | NA | non-coding | upstream | 106333 | 35984986 ~ 35985217 (-) |
| G2229466 | NA | non-coding | upstream | 157937 | 36036590 ~ 36040888 (-) |
| G2229175 | NA | other | downstream | 79050 | 35798804 ~ 35799357 (-) |
| G2227801 | NA | other | downstream | 1335788 | 34542217 ~ 34542619 (-) |
| G2227478 | NA | other | downstream | 1554752 | 34311142 ~ 34323655 (-) |
| G2226745 | NA | other | downstream | 2068513 | 33809379 ~ 33809894 (-) |
| LOC110521741 | LOC106584188 | other | downstream | 2175964 | 33686041 ~ 33710890 (-) |
| G2229647 | NA | other | upstream | 334493 | 36213146 ~ 36214385 (-) |
| LOC110521791 | LOC106584041 | other | upstream | 1622557 | 37498832 ~ 37523064 (-) |
| G2232820 | NA | other | upstream | 2886769 | 38765422 ~ 38767903 (-) |
| LOC110521806 | NA | other | upstream | 2960253 | 38838904 ~ 38856693 (-) |
