G2229262


Basic Information

Item Value
gene id G2229262
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 35900498 ~ 35902779 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2549054
TGATTGATCTGTGCCATCTACTGGAAAAATACTCTAATTGACATTTTCATATGGCTGCGGCCACACAGAGATGCATGAGCGCAGATGAAACCTTATATGCATTCATCAGTTTTCTGTTTTTGTCCATCAAAAGTTTAACTCAATGAAACTATCTTAGGACAAGTTGCATGTGTAAAAAGACAAGACGACTTGTGCAGTTTTTGTCTGACAATAATCAACGGAAAATGCAAAAGCATTTGCTCAATCCGGAAGTTTTGGACACAACATATCTATGTGGCTGTAGCCTAAATGACAAAAGTAGGAATGTAATATATGAGTTATAGTTCTATTTTCCATATGTGAGTGAAGTAACATGAATTTACAAATTCTTAAAatagagcagtggaggctgctgaggggaggacagccttgcggtaatggctggaatgaagtAAACAGAATGGCGTcagacacatggaaaccatgtgttggatgtgtttgatacaattccactccagccattaccagtaGCCCGTCGTCCCCAATtaaaaggtgccaccaacctcatgTGCAATAGAGTACTCAAGTTATGCTCTTGGGCCAGAGAACTCAGGAAAACACAGAGGTAGGAGACACGGATCACAGAAACATGTGAGTATGGAAAACAGTTCCCTGAGCCCATCGACTCTCCAACAATACGACAAGGAAGAGACTTCGGTGTACATCCCAAATGGGAGCTTAtttccaatatagtgcactacgtttgaccagaggtACACTACTGTTCCTCACACAGTTACCAGTGCTACACCATGTCATTGTCAAGAACAAGACAGTAATCATAGTACCCCTTACAACAATATGTTGCACTGTTTCATATCTCCTCAGAGTTATTCATCTTTCAAACATAATGCATCATGTTAAATATACAGACAATTATGTGTTCAAAGACATAAGTATTTATAAAAACGATGCACATCAATTATAAATATTTCAGCCAATGTATAAAACCCACATCTTTTAAAATCTGTTAATATCTGTTGAAAGGGACACCAGATATAGGCTTTTGTCTAATATAACAAACGTGGGCTGTACGCAGAAGATGCCTGCTGGGTGTCGACGAACGGAGACGATTCAACATGTAGTATTGTCAGGAGATGAATAAAAAATAGCAGACGATACTCTGTTGTCATATGCAATAGAACGGTCACTCGCTAATTTTAACCGATCAGCGTGGTCTGATTTGTCTAAGACATCAGTGCTCTAGCTTTAATCTTAAACTCTATGATATGGTGCTACTCCATGGTGGGGCTTAACTATTAAGTTGATGCTAAACAAACCCAGTCGATTGTAGCAGTGCTTGACTGAAATCCTTTTGGGTGTAGGTACAGTTTATATTGGTGTGTTCCGGCCCAAGTCAAGCACGGGATTGTAGAGTATCCTATGTTTCACTGATGATATGAGTTCAAAAGGATTCGCTGAAGTGATTGAAAGTGACCCTATTCATTGTTGAAAGCCTTTTACTCGGCATGGCATGTAAAGCCAGACTAGTAATGCTGTGTGATTATAGGGTAATATCATATAGATTACAGTTAAACAAATAAAGTTGTTGGAAAAAATGTCCTAAAAATACTAACATACATGACAGATTCCCTCCCTTTACAATGACATCCAGATCATATACATAAAtatcagtggtgtttgataccgtacATTCCAGCCATCACAATGGTCTCTGCCCATCAGCCTCATCTGATAAGCAGACTTCGTTAATATAAGCATTGGTTTTCTTGAGAAGATTAAGTCCTCGTGCACTTCAGGGTCAAGTTTCCTCTAGGAACAGATCTATGATCAGTTCAGATTTCCCCTCACCTAATCTTAACCATAAATGGGGGAAATGCAAAATCTGACCAGCGTCAAGGTGAAATGTCACCCTACAACCCTGGTGGCAGGGTAAAGATGTTGCTACTGTGCTCCCCTCTGCTGGTAGTTTGCCATAATGCAACACATTAGTCTTCTCTACATCGGCATTTAAGTGCAGTATGTACCAGCAGGACTAACTGTATGTctgtggtgtgtgagtgtgtgtgtgtgtgtgtgtgtggtgtgtgagtgtgtgtctgtgtgtgtgtccaagtcTTATTTCTTCAGTGATCCAATCATCACCTTGGAGACGAAGTTGACGATGGCACTGGCAGGTTGTTCGGGGTCGTGTTCAGCAAACAGGTGACACACATTCTCCGTCCCACTCATCGACTTCCTCGCC

Function

NR:

description
tensin-3-like isoform X2

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2549054 True 2245 lncRNA 0.41 2 35900498 35902779
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110521770 igfbp-1a2 coding upstream 95427 35800643 ~ 35805071 (+)
LOC110521768 sirt5 coding upstream 165538 35693310 ~ 35735400 (+)
tbc1d7 tbc1d7 coding upstream 266459 35619919 ~ 35634039 (+)
wu:fi04e12 LOC106584072 coding upstream 282239 35582273 ~ 35618259 (+)
psmg4 psmg4 coding upstream 355063 35543507 ~ 35545435 (+)
LOC110520994 LOC106584065 coding downstream 100530 36003309 ~ 36062700 (+)
LOC110520956 LOC106583994 coding downstream 535833 36438612 ~ 36489124 (+)
LOC110521776 LOC106584062 coding downstream 600372 36503151 ~ 36517233 (+)
LOC118945799 NA coding downstream 612023 36514802 ~ 36516539 (+)
LOC110521781 LOC106584055 coding downstream 773378 36676157 ~ 36685931 (+)
G2228968 NA non-coding upstream 54223 35844783 ~ 35846275 (+)
G2228942 NA non-coding upstream 100980 35799127 ~ 35799518 (+)
G2228932 NA non-coding upstream 120741 35779477 ~ 35779757 (+)
G2228834 NA non-coding upstream 256622 35641442 ~ 35643876 (+)
G2228833 NA non-coding upstream 262019 35638023 ~ 35638479 (+)
G2229268 NA non-coding downstream 7326 35910105 ~ 35910623 (+)
G2229270 NA non-coding downstream 9769 35912548 ~ 35912774 (+)
G2229355 NA non-coding downstream 68257 35971036 ~ 35971255 (+)
G2229381 NA non-coding downstream 85959 35988738 ~ 35988977 (+)
G2229398 NA non-coding downstream 161451 36064230 ~ 36067189 (+)
G2228777 NA other upstream 381256 35518234 ~ 35519242 (+)
LOC110521757 NA other upstream 710347 35181902 ~ 35190209 (+)
G2225948 NA other upstream 2295604 33572140 ~ 33604894 (+)
insl5a rel3 other downstream 1682247 37584989 ~ 37587002 (+)
G2231371 NA other downstream 2420581 38315783 ~ 38336981 (+)
G2232661 LOC105030512 other downstream 2887536 38790315 ~ 38790675 (+)
G2232855 LOC100380853 other downstream 2909871 38812650 ~ 38813379 (+)
LOC110521001 LOC106584026 other downstream 3271867 39117484 ~ 39202411 (+)

Expression

G2229262 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
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G2229262 Expression in each Bioproject

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G2229262 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
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Co-expression Network