G2229268


Basic Information

Item Value
gene id G2229268
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 35910105 ~ 35910623 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2549060
tgccaaatcttttcagtctcctgagggggaataggttttgttgtgccctcttcacgactgtcttggtgtgcttggaccatgttagtttgttggtgatgtggacgccaaggaacttgaagctgtcaacctgctcagtcctccttttcctatagtccacaatcatctcctttgtcttgatcacgttgagggagaggttgttgtccttgcaccacacggtcaggtctctgacctcctctctatgggctgtctcatcattgttggtgatcaggcctaccactgttgtgtcatcaacaaatgatggtgttgaagtcgtgcctggccgtgcagtcatgagtgaacagggagtacaggatagtactgagcacgcacacctggttgaggatcagcgtggcgaatgtgttgttacctacccttaccacctgggggcggcacgtcaggaagtccaggagccagttgcagagggaggtgtttagtcccagggtccttagcttagtgatgagctttgagggcactatggtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2549060 True 519 lncRNA 0.51 1 35910105 35910623

Neighbor

gene id symbol gene type direction distance location
LOC110521770 igfbp-1a2 coding upstream 105034 35800643 ~ 35805071 (+)
LOC110521768 sirt5 coding upstream 175145 35693310 ~ 35735400 (+)
tbc1d7 tbc1d7 coding upstream 276066 35619919 ~ 35634039 (+)
wu:fi04e12 LOC106584072 coding upstream 291846 35582273 ~ 35618259 (+)
psmg4 psmg4 coding upstream 364670 35543507 ~ 35545435 (+)
LOC110520994 LOC106584065 coding downstream 92686 36003309 ~ 36062700 (+)
LOC110520956 LOC106583994 coding downstream 527989 36438612 ~ 36489124 (+)
LOC110521776 LOC106584062 coding downstream 592528 36503151 ~ 36517233 (+)
LOC118945799 NA coding downstream 604179 36514802 ~ 36516539 (+)
LOC110521781 LOC106584055 coding downstream 765534 36676157 ~ 36685931 (+)
G2229262 NA non-coding upstream 7326 35900498 ~ 35902779 (+)
G2228968 NA non-coding upstream 63830 35844783 ~ 35846275 (+)
G2228942 NA non-coding upstream 110587 35799127 ~ 35799518 (+)
G2228932 NA non-coding upstream 130348 35779477 ~ 35779757 (+)
G2228834 NA non-coding upstream 266229 35641442 ~ 35643876 (+)
G2229270 NA non-coding downstream 1925 35912548 ~ 35912774 (+)
G2229355 NA non-coding downstream 60413 35971036 ~ 35971255 (+)
G2229381 NA non-coding downstream 78115 35988738 ~ 35988977 (+)
G2229398 NA non-coding downstream 153607 36064230 ~ 36067189 (+)
G2229561 NA non-coding downstream 245063 36155686 ~ 36156108 (+)
G2228777 NA other upstream 390863 35518234 ~ 35519242 (+)
LOC110521757 NA other upstream 719954 35181902 ~ 35190209 (+)
G2225948 NA other upstream 2305211 33572140 ~ 33604894 (+)
insl5a rel3 other downstream 1674403 37584989 ~ 37587002 (+)
G2231371 NA other downstream 2412737 38315783 ~ 38336981 (+)
G2232661 LOC105030512 other downstream 2879692 38790315 ~ 38790675 (+)
G2232855 LOC100380853 other downstream 2902027 38812650 ~ 38813379 (+)
LOC110521001 LOC106584026 other downstream 3264023 39117484 ~ 39202411 (+)

Expression


Co-expression Network