G2229381


Basic Information

Item Value
gene id G2229381
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 35988738 ~ 35988977 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2549174
ccccatgagaggatggctttcacttcagcagtgataaattcatgaacttctttgatgaaaagatcatgatcattaggggtggcaggtagcggctgtggttagagcgttggactagtaaccgaaagattgcaagatcgaatcaccgagctgacaatgtaaaaatctgtcattctgcccttgaacaaggcagttaacccactgttcctaggacatcattgaaaataagaatttgttcttaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2549174 True 240 lncRNA 0.42 1 35988738 35988977

Neighbor

gene id symbol gene type direction distance location
LOC110521770 igfbp-1a2 coding upstream 183667 35800643 ~ 35805071 (+)
LOC110521768 sirt5 coding upstream 253778 35693310 ~ 35735400 (+)
tbc1d7 tbc1d7 coding upstream 354699 35619919 ~ 35634039 (+)
wu:fi04e12 LOC106584072 coding upstream 370479 35582273 ~ 35618259 (+)
psmg4 psmg4 coding upstream 443303 35543507 ~ 35545435 (+)
LOC110520994 LOC106584065 coding downstream 14332 36003309 ~ 36062700 (+)
LOC110520956 LOC106583994 coding downstream 449635 36438612 ~ 36489124 (+)
LOC110521776 LOC106584062 coding downstream 514174 36503151 ~ 36517233 (+)
LOC118945799 NA coding downstream 525825 36514802 ~ 36516539 (+)
LOC110521781 LOC106584055 coding downstream 687180 36676157 ~ 36685931 (+)
G2229355 NA non-coding upstream 17483 35971036 ~ 35971255 (+)
G2229270 NA non-coding upstream 75964 35912548 ~ 35912774 (+)
G2229268 NA non-coding upstream 78115 35910105 ~ 35910623 (+)
G2229262 NA non-coding upstream 85959 35900498 ~ 35902779 (+)
G2228968 NA non-coding upstream 142463 35844783 ~ 35846275 (+)
G2229398 NA non-coding downstream 75253 36064230 ~ 36067189 (+)
G2229561 NA non-coding downstream 166709 36155686 ~ 36156108 (+)
G2229564 NA non-coding downstream 169665 36158642 ~ 36158907 (+)
G2229959 NA non-coding downstream 531370 36520347 ~ 36523684 (+)
G2230040 NA non-coding downstream 638038 36627015 ~ 36627235 (+)
G2228777 NA other upstream 469496 35518234 ~ 35519242 (+)
LOC110521757 NA other upstream 798587 35181902 ~ 35190209 (+)
G2225948 NA other upstream 2383844 33572140 ~ 33604894 (+)
insl5a rel3 other downstream 1596049 37584989 ~ 37587002 (+)
G2231371 NA other downstream 2334383 38315783 ~ 38336981 (+)
G2232661 LOC105030512 other downstream 2801338 38790315 ~ 38790675 (+)
G2232855 LOC100380853 other downstream 2823673 38812650 ~ 38813379 (+)
LOC110521001 LOC106584026 other downstream 3185669 39117484 ~ 39202411 (+)

Expression


Co-expression Network