G2229564


Basic Information

Item Value
gene id G2229564
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 36158642 ~ 36158907 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2549366
cattcatcctcactcctctcccctgtaactattccccaggtcattgctgtaaatgagaatgtgttctcagtcaacttacctgggaaaataagggttaaataaatacaaatttgaTTTCACACGTGAAAATGAAAGAAATTAAGTGAAAGGCAGACATTGTAAATAACACATAGCAGACATGATTAAAAGGCACTCATAAATAGGCATGATACCAAATAACACATGCTGATACGTAATATATAAATAATGGCAGTCTCTAGTAAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2549366 True 266 lncRNA 0.35 1 36158642 36158907

Neighbor

gene id symbol gene type direction distance location
LOC110520994 LOC106584065 coding upstream 95942 36003309 ~ 36062700 (+)
LOC110521770 igfbp-1a2 coding upstream 353571 35800643 ~ 35805071 (+)
LOC110521768 sirt5 coding upstream 423682 35693310 ~ 35735400 (+)
tbc1d7 tbc1d7 coding upstream 524603 35619919 ~ 35634039 (+)
wu:fi04e12 LOC106584072 coding upstream 540383 35582273 ~ 35618259 (+)
LOC110520956 LOC106583994 coding downstream 279705 36438612 ~ 36489124 (+)
LOC110521776 LOC106584062 coding downstream 344244 36503151 ~ 36517233 (+)
LOC118945799 NA coding downstream 355895 36514802 ~ 36516539 (+)
LOC110521781 LOC106584055 coding downstream 517250 36676157 ~ 36685931 (+)
LOC110521782 LOC106584054 coding downstream 532509 36691416 ~ 36705489 (+)
G2229561 NA non-coding upstream 2534 36155686 ~ 36156108 (+)
G2229398 NA non-coding upstream 91453 36064230 ~ 36067189 (+)
G2229381 NA non-coding upstream 169665 35988738 ~ 35988977 (+)
G2229355 NA non-coding upstream 187387 35971036 ~ 35971255 (+)
G2229270 NA non-coding upstream 245868 35912548 ~ 35912774 (+)
G2229959 NA non-coding downstream 361440 36520347 ~ 36523684 (+)
G2230040 NA non-coding downstream 468108 36627015 ~ 36627235 (+)
G2230020 NA non-coding downstream 485683 36644590 ~ 36647937 (+)
G2230283 NA non-coding downstream 588517 36747424 ~ 36747831 (+)
LOC110520996 stxbp3 non-coding downstream 604218 36760942 ~ 36767311 (+)
G2228777 NA other upstream 639400 35518234 ~ 35519242 (+)
LOC110521757 NA other upstream 968491 35181902 ~ 35190209 (+)
G2225948 NA other upstream 2553748 33572140 ~ 33604894 (+)
insl5a rel3 other downstream 1426119 37584989 ~ 37587002 (+)
G2231371 NA other downstream 2164453 38315783 ~ 38336981 (+)
G2232661 LOC105030512 other downstream 2631408 38790315 ~ 38790675 (+)
G2232855 LOC100380853 other downstream 2653743 38812650 ~ 38813379 (+)
LOC110521001 LOC106584026 other downstream 3015739 39117484 ~ 39202411 (+)

Expression


Co-expression Network