G2229647


Basic Information

Item Value
gene id G2229647
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 36213146 ~ 36214385 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2549451
GGAGATCGCAACCACCACCCTAAGACCTGACATGGTGCTCTGGTCCCGTTCGCTCAAGAAGGTCTTCATCATTGAGCTCACAGTACCCTGGGAGGACTCAGTAGATGAGGCTTATGAGCGAAAGCATCTGCGCTATGCCGATCTAGCTGCCGAAGCACGGCATCATGGCTGGAACACAGAAGTCCGACCAGTGGAGGTGGGCTGCAGAGGTTTTGTGGCAacatctacaaccagactgcttagagaccttggaattaagggccagagccagcgttcggcaatcaaagctgtatcggaggcggcagaaggcagcagtcagtggctctggatgaagaggaaagaccccagctgggccccgaagtgagagggccaggaggtatgcggtcaacaatgcttgactcagggaggaggatgcccctgccatgcatagtcccatgggatgttggctatcatcaacaaggcaactcctatgactaattgggaatgggacgcaagcgtaggattgatcaccctgtcgctggccgccttaaggggagggtgtatagtgtgaaaggccgaaacaccctaggaaccaaaggtacactactgacgatgcgctccccaaatttcaccaggctcactgttcattaactcttggaagtgcttgcacaaaggatagtaacatctcatcctgtgttcttggaatctgaagcatcagcatttgtgggtttgattacaggctcaaaatggccaaaaacaaataactttcttctgaaactcatcagtctattcttgttctgagaaatgaaggctattccatgtgagaaattgggtactatttaatgaagctggcagttgaggacttgtgaggtgtctgtttctcaaactaaacactctaatgtacttgtcctctgatcagttgtgcaccggggcctcccactcctctttctattctggttagagacagcttgcactgttctgtgaagggagtagtacacagcgttgtacgagatcttcagtttcttggcaatttcacaCATGGAAtatccttaatttctcagaacaagaatagactgatgagtttcagaagaaagttatttgtttttggccattttgagcctgtaatcaaacccacaaatgctgatgcatttattagctaacacaatgtgccattggaacacaggagtgatgtttgctgataataggccatttccagctacaatagtcatttacaacattaacattgcctacactgtatttc

Function

NR:

description
hypothetical protein EH28_24717

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2549451 True 1240 TUCP 0.47 1 36213146 36214385

Neighbor

gene id symbol gene type direction distance location
LOC110521773 LOC106584067 coding downstream 246176 35900475 ~ 35966970 (-)
LOC118945798 NA coding downstream 292479 35918911 ~ 35920667 (-)
LOC110521771 igfbp-3a2 coding downstream 339754 35810568 ~ 35873392 (-)
phactr1 LOC106584070 coding downstream 495291 35642397 ~ 35717855 (-)
LOC110520993 LOC106584074 coding downstream 636099 35545576 ~ 35577047 (-)
LOC110521774 LOC106584064 coding upstream 56727 36271112 ~ 36275588 (-)
zc3h3 LOC106584063 coding upstream 70461 36284846 ~ 36368490 (-)
LOC110521777 LOC106584061 coding upstream 309074 36520352 ~ 36541228 (-)
LOC110520995 LOC106584060 coding upstream 356693 36571078 ~ 36597415 (-)
LOC110521778 LOC106584059 coding upstream 388811 36603196 ~ 36614084 (-)
G2229535 NA non-coding downstream 111834 36100824 ~ 36101312 (-)
G2229496 NA non-coding downstream 128120 36084803 ~ 36085026 (-)
G2229466 NA non-coding downstream 172258 36036590 ~ 36040888 (-)
G2229377 NA non-coding downstream 227929 35984986 ~ 35985217 (-)
G2229366 NA non-coding downstream 233748 35978995 ~ 35979398 (-)
G2230176 NA non-coding upstream 274898 36489283 ~ 36502092 (-)
G2230188 LOC106584062 non-coding upstream 297308 36511693 ~ 36517232 (-)
G2230235 NA non-coding upstream 409170 36623555 ~ 36623791 (-)
G2230238 NA non-coding upstream 415328 36629713 ~ 36629990 (-)
G2229175 NA other downstream 413789 35798804 ~ 35799357 (-)
G2227801 NA other downstream 1670527 34542217 ~ 34542619 (-)
G2227478 NA other downstream 1889491 34311142 ~ 34323655 (-)
G2226745 NA other downstream 2403252 33809379 ~ 33809894 (-)
LOC110521741 LOC106584188 other downstream 2510703 33686041 ~ 33710890 (-)
LOC110521791 LOC106584041 other upstream 1286825 37498832 ~ 37523064 (-)
G2232820 NA other upstream 2551037 38765422 ~ 38767903 (-)
LOC110521806 NA other upstream 2624521 38838904 ~ 38856693 (-)
G2234611 NA other upstream 3742530 39956915 ~ 39993914 (-)

Expression


Co-expression Network