G2230040


Basic Information

Item Value
gene id G2230040
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 36627015 ~ 36627235 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2549885
gagcaagcccatgtaatgctttgtaggttagcagtaaaaccttgaaatcagccctagctttaacaggaagccagtgtataGAGGcgagcactggagtaatatgatttaaaaaaatggttCTCGTCtagattctagcagctgtgtttagcactaatTTAactttatttagtgctttatccgggtaggcggaaagtagagcattgcagtagtctaacctagaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2549885 True 221 lncRNA 0.40 1 36627015 36627235

Neighbor

gene id symbol gene type direction distance location
LOC110521776 LOC106584062 coding upstream 109782 36503151 ~ 36517233 (+)
LOC118945799 NA coding upstream 110476 36514802 ~ 36516539 (+)
LOC110520956 LOC106583994 coding upstream 137891 36438612 ~ 36489124 (+)
LOC110520994 LOC106584065 coding upstream 564315 36003309 ~ 36062700 (+)
LOC110521770 igfbp-1a2 coding upstream 821944 35800643 ~ 35805071 (+)
LOC110521781 LOC106584055 coding downstream 48922 36676157 ~ 36685931 (+)
LOC110521782 LOC106584054 coding downstream 64181 36691416 ~ 36705489 (+)
LOC118945913 NA coding downstream 74135 36701370 ~ 36701505 (+)
LOC118945805 LOC106584052 coding downstream 108690 36735925 ~ 36740556 (+)
LOC110520996 stxbp3 coding downstream 133707 36760942 ~ 36767311 (+)
G2229959 NA non-coding upstream 103331 36520347 ~ 36523684 (+)
G2229564 NA non-coding upstream 468108 36158642 ~ 36158907 (+)
G2229561 NA non-coding upstream 470907 36155686 ~ 36156108 (+)
G2229398 NA non-coding upstream 559826 36064230 ~ 36067189 (+)
G2229381 NA non-coding upstream 638038 35988738 ~ 35988977 (+)
G2230020 NA non-coding downstream 17355 36644590 ~ 36647937 (+)
G2230283 NA non-coding downstream 120189 36747424 ~ 36747831 (+)
G2230359 NA non-coding downstream 176793 36804028 ~ 36804227 (+)
G2230377 NA non-coding downstream 188901 36816136 ~ 36816547 (+)
LOC110521768 sirt5 other upstream 891615 35693310 ~ 35735400 (+)
G2228777 NA other upstream 1107773 35518234 ~ 35519242 (+)
LOC110521757 NA other upstream 1436864 35181902 ~ 35190209 (+)
G2225948 NA other upstream 3022121 33572140 ~ 33604894 (+)
insl5a rel3 other downstream 957791 37584989 ~ 37587002 (+)
G2231371 NA other downstream 1696125 38315783 ~ 38336981 (+)
G2232661 LOC105030512 other downstream 2163080 38790315 ~ 38790675 (+)
G2232855 LOC100380853 other downstream 2185415 38812650 ~ 38813379 (+)
LOC110521001 LOC106584026 other downstream 2547411 39117484 ~ 39202411 (+)

Expression


Co-expression Network