G2230283


Basic Information

Item Value
gene id G2230283
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 36747424 ~ 36747831 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2550154
TGACCACCCCTCCCTATACCTGATTaaccacaactttgtaagatacagcaagtcacaccatgtgctcaatattgtcacatacaaacacaaggacaaagcatctgctgggctgttatctacagttttgcaacatgcaggtcacaccatgttactcagttcttgtcacacacacaaacaggcaagtaGATGTAGCAAGCAGTTGTTTAATCTCAAGGATATGCTCAAGTGCACAAATGCAGATACTTCACACAGCCAACATCAgataatatttaatcatatatacagtgccttgcgaaagtattcggcccccttgaacttggcgaccttttgccacatttcaggcttcaaacataaagatataaaacttttttgtgaagaatcaacaacaagtgggacacaatcatgaag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2550154 True 408 lncRNA 0.40 1 36747424 36747831

Neighbor

gene id symbol gene type direction distance location
LOC118945805 LOC106584052 coding upstream 6868 36735925 ~ 36740556 (+)
LOC110521782 LOC106584054 coding upstream 41935 36691416 ~ 36705489 (+)
LOC118945913 NA coding upstream 45919 36701370 ~ 36701505 (+)
LOC110521781 LOC106584055 coding upstream 61493 36676157 ~ 36685931 (+)
LOC110521776 LOC106584062 coding upstream 230191 36503151 ~ 36517233 (+)
LOC110520996 stxbp3 coding downstream 13111 36760942 ~ 36767311 (+)
LOC110521785 LOC106584051 coding downstream 20428 36768259 ~ 36791935 (+)
LOC110521788 cef10 coding downstream 315062 37062893 ~ 37065854 (+)
insl5a rel3 coding downstream 837158 37584989 ~ 37587002 (+)
LOC118945789 NA coding downstream 1290536 38038367 ~ 38056640 (+)
G2230020 NA non-coding upstream 99487 36644590 ~ 36647937 (+)
G2230040 NA non-coding upstream 120189 36627015 ~ 36627235 (+)
G2229959 NA non-coding upstream 223740 36520347 ~ 36523684 (+)
G2229564 NA non-coding upstream 588517 36158642 ~ 36158907 (+)
G2229561 NA non-coding upstream 591316 36155686 ~ 36156108 (+)
G2230359 NA non-coding downstream 56197 36804028 ~ 36804227 (+)
G2230377 NA non-coding downstream 68305 36816136 ~ 36816547 (+)
G2230379 NA non-coding downstream 68785 36816616 ~ 36816816 (+)
G2230394 NA non-coding downstream 81402 36829233 ~ 36829473 (+)
LOC110521770 igfbp-1a2 other upstream 944456 35800643 ~ 35805071 (+)
LOC110521768 sirt5 other upstream 1012024 35693310 ~ 35735400 (+)
G2228777 NA other upstream 1228182 35518234 ~ 35519242 (+)
LOC110521757 NA other upstream 1557273 35181902 ~ 35190209 (+)
G2225948 NA other upstream 3142530 33572140 ~ 33604894 (+)
G2231371 NA other downstream 1575529 38315783 ~ 38336981 (+)
G2232661 LOC105030512 other downstream 2042484 38790315 ~ 38790675 (+)
G2232855 LOC100380853 other downstream 2064819 38812650 ~ 38813379 (+)
LOC110521001 LOC106584026 other downstream 2426815 39117484 ~ 39202411 (+)

Expression


Co-expression Network