G2230377


Basic Information

Item Value
gene id G2230377
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 36816136 ~ 36816547 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2550248
atttattttatttcacctatatttaaccaggtaggctagttgagaacaagttctcatttgcaactgcgacctggccaagataaagcaaagcagtgtgacacagacaacaacacagagttacacatggagtaaacaataaacaagccaataacacgataaacaagtcaatgacacagtagaaaaaagaaagtctatacagtatacagtgtgtgcaaaaggcatgaggaggtaggcaataaataggccataggagcgaatagttacaatttagcagattaacactggagtgataaatgagcagatgatgatgtgcaagtagagatactggtgtgcaaaagagcagaaaagttaatcaaataaaaacagtatgggattgaggtagatagattgggtgggctatttacagatggac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2550248 True 412 lncRNA 0.38 1 36816136 36816547

Neighbor

gene id symbol gene type direction distance location
LOC110521785 LOC106584051 coding upstream 24201 36768259 ~ 36791935 (+)
LOC110520996 stxbp3 coding upstream 48825 36760942 ~ 36767311 (+)
LOC118945805 LOC106584052 coding upstream 75580 36735925 ~ 36740556 (+)
LOC110521782 LOC106584054 coding upstream 110647 36691416 ~ 36705489 (+)
LOC110521788 cef10 coding downstream 246346 37062893 ~ 37065854 (+)
insl5a rel3 coding downstream 768442 37584989 ~ 37587002 (+)
LOC118945789 NA coding downstream 1221820 38038367 ~ 38056640 (+)
LOC110521799 NA coding downstream 1406565 38223112 ~ 38224803 (+)
LOC110521800 LOC100286690 coding downstream 1413905 38230452 ~ 38285097 (+)
G2230359 NA non-coding upstream 11909 36804028 ~ 36804227 (+)
G2230283 NA non-coding upstream 68305 36747424 ~ 36747831 (+)
G2230020 NA non-coding upstream 168199 36644590 ~ 36647937 (+)
G2230040 NA non-coding upstream 188901 36627015 ~ 36627235 (+)
G2230379 NA non-coding downstream 69 36816616 ~ 36816816 (+)
G2230394 NA non-coding downstream 12686 36829233 ~ 36829473 (+)
G2230397 NA non-coding downstream 14045 36830592 ~ 36830802 (+)
G2230454 LOC106584048 non-coding downstream 97479 36914026 ~ 36927025 (+)
G2230483 NA non-coding downstream 154407 36970954 ~ 37050622 (+)
LOC110521770 igfbp-1a2 other upstream 1013168 35800643 ~ 35805071 (+)
LOC110521768 sirt5 other upstream 1080736 35693310 ~ 35735400 (+)
G2228777 NA other upstream 1296894 35518234 ~ 35519242 (+)
LOC110521757 NA other upstream 1625985 35181902 ~ 35190209 (+)
G2225948 NA other upstream 3211242 33572140 ~ 33604894 (+)
G2231371 NA other downstream 1506813 38315783 ~ 38336981 (+)
G2232661 LOC105030512 other downstream 1973768 38790315 ~ 38790675 (+)
G2232855 LOC100380853 other downstream 1996103 38812650 ~ 38813379 (+)
LOC110521001 LOC106584026 other downstream 2358099 39117484 ~ 39202411 (+)

Expression


Co-expression Network