G2230379


Basic Information

Item Value
gene id G2230379
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 36816616 ~ 36816816 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2550250
agtctccaacttcagcgatttttgcaattcgttccagtcactggcagcagagaactggaaggaaaggcggccaaatgaggtgttggctttggggatgatcagtgagatatacctgctggaacgtgtgctacgggtgggtgttgttatcgtgaccagtgaactgagataaggcggagctttacctagcatagacttatagat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2550250 True 201 lncRNA 0.48 1 36816616 36816816

Neighbor

gene id symbol gene type direction distance location
LOC110521785 LOC106584051 coding upstream 24681 36768259 ~ 36791935 (+)
LOC110520996 stxbp3 coding upstream 49305 36760942 ~ 36767311 (+)
LOC118945805 LOC106584052 coding upstream 76060 36735925 ~ 36740556 (+)
LOC110521782 LOC106584054 coding upstream 111127 36691416 ~ 36705489 (+)
LOC110521788 cef10 coding downstream 246077 37062893 ~ 37065854 (+)
insl5a rel3 coding downstream 768173 37584989 ~ 37587002 (+)
LOC118945789 NA coding downstream 1221551 38038367 ~ 38056640 (+)
LOC110521799 NA coding downstream 1406296 38223112 ~ 38224803 (+)
LOC110521800 LOC100286690 coding downstream 1413636 38230452 ~ 38285097 (+)
G2230377 NA non-coding upstream 69 36816136 ~ 36816547 (+)
G2230359 NA non-coding upstream 12389 36804028 ~ 36804227 (+)
G2230283 NA non-coding upstream 68785 36747424 ~ 36747831 (+)
G2230020 NA non-coding upstream 168679 36644590 ~ 36647937 (+)
G2230394 NA non-coding downstream 12417 36829233 ~ 36829473 (+)
G2230397 NA non-coding downstream 13776 36830592 ~ 36830802 (+)
G2230454 LOC106584048 non-coding downstream 97210 36914026 ~ 36927025 (+)
G2230483 NA non-coding downstream 154138 36970954 ~ 37050622 (+)
G2230597 NA non-coding downstream 323688 37140504 ~ 37145680 (+)
LOC110521770 igfbp-1a2 other upstream 1013648 35800643 ~ 35805071 (+)
LOC110521768 sirt5 other upstream 1081216 35693310 ~ 35735400 (+)
G2228777 NA other upstream 1297374 35518234 ~ 35519242 (+)
LOC110521757 NA other upstream 1626465 35181902 ~ 35190209 (+)
G2225948 NA other upstream 3211722 33572140 ~ 33604894 (+)
G2231371 NA other downstream 1506544 38315783 ~ 38336981 (+)
G2232661 LOC105030512 other downstream 1973499 38790315 ~ 38790675 (+)
G2232855 LOC100380853 other downstream 1995834 38812650 ~ 38813379 (+)
LOC110521001 LOC106584026 other downstream 2357830 39117484 ~ 39202411 (+)

Expression


Co-expression Network