Gene
RNA
| Item | Value |
|---|---|
| gene id | G2231552 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 37022592 ~ 37022847 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2551528 | True | 231 | lncRNA | 0.45 | 2 | 37022592 | 37022847 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521787 | LOC106584048 | coding | downstream | 95542 | 36916748 ~ 36927050 (-) |
| LOC110521786 | LOC106584049 | coding | downstream | 111385 | 36836457 ~ 36911207 (-) |
| LOC110521784 | LOC106584052 | coding | downstream | 281043 | 36724255 ~ 36741549 (-) |
| ccdc17 | LOC106583999 | coding | downstream | 301929 | 36707903 ~ 36720663 (-) |
| LOC118945788 | LOC106607871 | coding | downstream | 346815 | 36670200 ~ 36675777 (-) |
| LOC110521790 | LOC106584045 | coding | upstream | 150249 | 37173096 ~ 37356928 (-) |
| LOC118945800 | NA | coding | upstream | 387275 | 37410122 ~ 37414157 (-) |
| LOC110521791 | LOC106584041 | coding | upstream | 475985 | 37498832 ~ 37523064 (-) |
| LOC110520997 | LOC106584040 | coding | upstream | 526993 | 37549840 ~ 37559235 (-) |
| pars2 | LOC106584039 | coding | upstream | 537383 | 37560230 ~ 37562783 (-) |
| G2231470 | NA | non-coding | downstream | 130816 | 36891543 ~ 36891776 (-) |
| G2231465 | NA | non-coding | downstream | 141295 | 36881045 ~ 36881297 (-) |
| G2230378 | NA | non-coding | downstream | 206056 | 36816329 ~ 36816536 (-) |
| G2230286 | NA | non-coding | downstream | 273443 | 36748895 ~ 36749149 (-) |
| G2230284 | NA | non-coding | downstream | 274924 | 36747426 ~ 36747668 (-) |
| LOC110520999 | sgip1 | non-coding | upstream | 584391 | 37588048 ~ 37698966 (-) |
| G2231991 | NA | non-coding | upstream | 679886 | 37702733 ~ 37702946 (-) |
| G2231993 | NA | non-coding | upstream | 683390 | 37706237 ~ 37706499 (-) |
| G2232001 | NA | non-coding | upstream | 696233 | 37719080 ~ 37719638 (-) |
| LOC110521777 | LOC106584061 | other | downstream | 497795 | 36520352 ~ 36541228 (-) |
| G2229647 | NA | other | downstream | 808207 | 36213146 ~ 36214385 (-) |
| G2229175 | NA | other | downstream | 1223235 | 35798804 ~ 35799357 (-) |
| G2227801 | NA | other | downstream | 2479973 | 34542217 ~ 34542619 (-) |
| G2227478 | NA | other | downstream | 2698937 | 34311142 ~ 34323655 (-) |
| G2232820 | NA | other | upstream | 1742575 | 38765422 ~ 38767903 (-) |
| LOC110521806 | NA | other | upstream | 1816059 | 38838904 ~ 38856693 (-) |
| G2234611 | NA | other | upstream | 2934068 | 39956915 ~ 39993914 (-) |
| G2234837 | NA | other | upstream | 3262807 | 40285654 ~ 40286282 (-) |
