Gene
RNA
| Item | Value |
|---|---|
| gene id | G2232003 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 37721628 ~ 37721858 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2552050 | True | 231 | lncRNA | 0.50 | 1 | 37721628 | 37721858 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520999 | sgip1 | coding | downstream | 22662 | 37588048 ~ 37698966 (-) |
| pars2 | LOC106584039 | coding | downstream | 158845 | 37560230 ~ 37562783 (-) |
| LOC110520997 | LOC106584040 | coding | downstream | 162393 | 37549840 ~ 37559235 (-) |
| LOC110521791 | LOC106584041 | coding | downstream | 198564 | 37498832 ~ 37523064 (-) |
| LOC118945800 | NA | coding | downstream | 307471 | 37410122 ~ 37414157 (-) |
| LOC110521793 | LOC106584037 | coding | upstream | 8640 | 37730498 ~ 37818330 (-) |
| LOC110521794 | NA | coding | upstream | 106208 | 37828066 ~ 37829673 (-) |
| LOC118945821 | LOC106584037 | coding | upstream | 201988 | 37923846 ~ 38011831 (-) |
| LOC110521795 | LOC106584036 | coding | upstream | 323673 | 38045531 ~ 38121078 (-) |
| LOC110521797 | dnajc6 | coding | upstream | 430910 | 38152766 ~ 38213493 (-) |
| G2232001 | NA | non-coding | downstream | 1990 | 37719080 ~ 37719638 (-) |
| G2231993 | NA | non-coding | downstream | 15129 | 37706237 ~ 37706499 (-) |
| G2231991 | NA | non-coding | downstream | 18682 | 37702733 ~ 37702946 (-) |
| LOC110521790 | LOC106584045 | non-coding | downstream | 365004 | 37173096 ~ 37356928 (-) |
| G2232312 | LOC106600668 | non-coding | upstream | 420114 | 38141972 ~ 38143264 (-) |
| G2232321 | NA | non-coding | upstream | 434728 | 38156586 ~ 38156986 (-) |
| G2232342 | NA | non-coding | upstream | 479763 | 38201621 ~ 38202115 (-) |
| LOC110521000 | LOC106584032 | non-coding | upstream | 565539 | 38287397 ~ 38378117 (-) |
| LOC110521777 | LOC106584061 | other | downstream | 1196831 | 36520352 ~ 36541228 (-) |
| G2229647 | NA | other | downstream | 1507243 | 36213146 ~ 36214385 (-) |
| G2229175 | NA | other | downstream | 1922271 | 35798804 ~ 35799357 (-) |
| G2227801 | NA | other | downstream | 3179009 | 34542217 ~ 34542619 (-) |
| G2232820 | NA | other | upstream | 1043564 | 38765422 ~ 38767903 (-) |
| LOC110521806 | NA | other | upstream | 1117048 | 38838904 ~ 38856693 (-) |
| G2234611 | NA | other | upstream | 2235057 | 39956915 ~ 39993914 (-) |
| G2234837 | NA | other | upstream | 2563796 | 40285654 ~ 40286282 (-) |
| G2237502 | NA | other | upstream | 4558898 | 42280756 ~ 42281362 (-) |
