G2232342


Basic Information

Item Value
gene id G2232342
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 38201621 ~ 38202115 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2552408
ggtatttttcTTTCCATTGGAGCAAGATGTTATCTATttttggagtgagatcatttctgtCTTTCAGGATGTGTATTCCGAGTATGTCCACCGGGGTCAGACCATTTGATTGGTAAAATACACGCAatgtatacagtcgtggccaaaagatttgagaatgacacaaatattaattttcacaaggtctgctgcctcagtgtctttagatagttttgtcagatgttactatggaatactgaagtataattacaagcatttcataagtgtcaaaggcttttattgacaattacatgaagttgatgcaaagagtcaatatttgcagtgttgagccttctttttcaagacctctgcaatctgccctggcatgctgtcaattaacttctgggacacatcctgactgatggcagcccattcttgcataaccAATGCTTGGAGAttgtcagaatttgtgtgtttttgtttgtccacacgcctcttgaggattgaccacaagtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2552408 True 495 lncRNA 0.39 1 38201621 38202115

Neighbor

gene id symbol gene type direction distance location
LOC110521795 LOC106584036 coding downstream 80543 38045531 ~ 38121078 (-)
LOC118945821 LOC106584037 coding downstream 189790 37923846 ~ 38011831 (-)
LOC110521794 NA coding downstream 371948 37828066 ~ 37829673 (-)
LOC110521793 LOC106584037 coding downstream 383291 37730498 ~ 37818330 (-)
LOC110520999 sgip1 coding downstream 502655 37588048 ~ 37698966 (-)
LOC110521798 LOC106584033 coding upstream 14812 38216927 ~ 38221934 (-)
LOC110521000 LOC106584032 coding upstream 85851 38287397 ~ 38378117 (-)
LOC110521803 LOC106584031 coding upstream 182076 38384191 ~ 38464591 (-)
LOC110521804 LOC106584030 coding upstream 311867 38513982 ~ 38710061 (-)
LOC110521805 pgm1 coding upstream 545327 38747442 ~ 38759963 (-)
LOC110521797 dnajc6 non-coding downstream 15815 38152766 ~ 38213493 (-)
G2232321 NA non-coding downstream 44635 38156586 ~ 38156986 (-)
G2232312 LOC106600668 non-coding downstream 58357 38141972 ~ 38143264 (-)
G2232003 NA non-coding downstream 479763 37721628 ~ 37721858 (-)
G2232001 NA non-coding downstream 481983 37719080 ~ 37719638 (-)
G2232387 NA non-coding upstream 139624 38341739 ~ 38349231 (-)
G2232417 NA non-coding upstream 222986 38425101 ~ 38425341 (-)
G2232499 NA non-coding upstream 310315 38512430 ~ 38512629 (-)
LOC110521791 LOC106584041 other downstream 678615 37498832 ~ 37523064 (-)
LOC110521777 LOC106584061 other downstream 1676824 36520352 ~ 36541228 (-)
G2229647 NA other downstream 1987236 36213146 ~ 36214385 (-)
G2229175 NA other downstream 2402264 35798804 ~ 35799357 (-)
G2227801 NA other downstream 3659002 34542217 ~ 34542619 (-)
G2232820 NA other upstream 563307 38765422 ~ 38767903 (-)
LOC110521806 NA other upstream 636791 38838904 ~ 38856693 (-)
G2234611 NA other upstream 1754800 39956915 ~ 39993914 (-)
G2234837 NA other upstream 2083539 40285654 ~ 40286282 (-)
G2237502 NA other upstream 4078641 42280756 ~ 42281362 (-)

Expression


Co-expression Network