G2232655


Basic Information

Item Value
gene id G2232655
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 38780581 ~ 38780824 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2552739
ATTTGATTGCGTAAACCCACAGATTCAttagctgtccaggtggctggtctcagaccatcccacaggtgaagaagccaaatgtggaggtcctgggctggcgtggttacatgtggtctgtggttgtgaggccggttgggcgttctgtcaaattctctaaaatgacgttggaggcagctgatgGTAGAGAAATTGACATAAAAGTATCTGGCAAAAACTCTGGTGGACTTTCCTCCAGTCAGCATGC

Function

NR:

description
hypothetical protein EH28_17880

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2552739 True 244 lncRNA 0.49 1 38780581 38780824

Neighbor

gene id symbol gene type direction distance location
LOC110521800 LOC100286690 coding upstream 495484 38230452 ~ 38285097 (+)
LOC118945881 NA coding upstream 519196 38261239 ~ 38261385 (+)
LOC110521799 NA coding upstream 555778 38223112 ~ 38224803 (+)
LOC118945789 NA coding upstream 723941 38038367 ~ 38056640 (+)
insl5a rel3 coding upstream 1193580 37584989 ~ 37587002 (+)
LOC110521807 NA coding downstream 52960 38833784 ~ 38838725 (+)
LOC110521001 LOC106584026 coding downstream 336660 39117484 ~ 39202411 (+)
LOC110521810 LOC106584025 coding downstream 457786 39238610 ~ 39332571 (+)
LOC110521814 dmrt2b coding downstream 932200 39713024 ~ 39722927 (+)
LOC110521815 fam183a coding downstream 979077 39759901 ~ 39761629 (+)
G2232648 NA non-coding upstream 9024 38771334 ~ 38771557 (+)
G2232583 pgm1 non-coding upstream 30125 38747444 ~ 38750456 (+)
G2232586 NA non-coding upstream 34047 38746025 ~ 38746534 (+)
G2232638 NA non-coding upstream 38595 38741769 ~ 38741986 (+)
G2232633 NA non-coding upstream 42356 38737880 ~ 38738225 (+)
G2232660 NA non-coding downstream 8710 38789534 ~ 38789778 (+)
G2232856 NA non-coding downstream 33882 38814706 ~ 38878511 (+)
G2232859 NA non-coding downstream 40704 38821528 ~ 38822463 (+)
G2232873 NA non-coding downstream 59763 38840587 ~ 38844285 (+)
G2231371 NA other upstream 443600 38315783 ~ 38336981 (+)
LOC110521770 igfbp-1a2 other upstream 2977613 35800643 ~ 35805071 (+)
LOC110521768 sirt5 other upstream 3045181 35693310 ~ 35735400 (+)
G2228777 NA other upstream 3261339 35518234 ~ 35519242 (+)
G2232661 LOC105030512 other downstream 9491 38790315 ~ 38790675 (+)
G2232855 LOC100380853 other downstream 31826 38812650 ~ 38813379 (+)
LOC110521817 LOC106584021 other downstream 1019449 39800038 ~ 39812756 (+)
pik3r3b LOC106584012 other downstream 1362797 40143590 ~ 40468579 (+)

Expression


Co-expression Network