G2232661 (LOC105030512)



Basic Information


Item Value
gene id G2232661
gene name LOC105030512
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 38790315 ~ 38790675 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2552745
gccttaggcatgctgcaaggaggcatgaggactgcagatgtggccagggcaataaattgcattgtccgtactgtgagacgcctaagacagcgctacagggagacaagacggacaactgatcgtccttgcagtggcagaccacgtgtaacaacacctgcacaggatcggtacatccgaacatcacacctgcgggacaggtacaagatggcaacaacaactgcccgagttacaccaggaacgcacaatccctccatcagtgctcagactgtccgcaataggctgagagatgctggactgagggcttgtaggcctgttgtaaggcaggtcctcaccagacatcaccggcaacaatgtcgtcTAT

Function


NR:

description
PREDICTED: uncharacterized protein LOC109630516

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2552745 True 361 TUCP 0.54 1 38790315 38790675

Neighbor


gene id symbol gene type direction distance location
LOC110521800 LOC100286690 coding upstream 505218 38230452 ~ 38285097 (+)
LOC118945881 NA coding upstream 528930 38261239 ~ 38261385 (+)
LOC110521799 NA coding upstream 565512 38223112 ~ 38224803 (+)
LOC118945789 NA coding upstream 733675 38038367 ~ 38056640 (+)
insl5a rel3 coding upstream 1203314 37584989 ~ 37587002 (+)
LOC110521807 NA coding downstream 43109 38833784 ~ 38838725 (+)
LOC110521001 LOC106584026 coding downstream 326809 39117484 ~ 39202411 (+)
LOC110521810 LOC106584025 coding downstream 447935 39238610 ~ 39332571 (+)
LOC110521814 dmrt2b coding downstream 922349 39713024 ~ 39722927 (+)
LOC110521815 fam183a coding downstream 969226 39759901 ~ 39761629 (+)
G2232660 NA non-coding upstream 537 38789534 ~ 38789778 (+)
G2232655 NA non-coding upstream 9491 38780581 ~ 38780824 (+)
G2232648 NA non-coding upstream 18758 38771334 ~ 38771557 (+)
G2232583 pgm1 non-coding upstream 39859 38747444 ~ 38750456 (+)
G2232586 NA non-coding upstream 43781 38746025 ~ 38746534 (+)
G2232856 NA non-coding downstream 24031 38814706 ~ 38878511 (+)
G2232859 NA non-coding downstream 30853 38821528 ~ 38822463 (+)
G2232873 NA non-coding downstream 49912 38840587 ~ 38844285 (+)
G2231371 NA other upstream 453334 38315783 ~ 38336981 (+)
LOC110521770 igfbp-1a2 other upstream 2987347 35800643 ~ 35805071 (+)
LOC110521768 sirt5 other upstream 3054915 35693310 ~ 35735400 (+)
G2228777 NA other upstream 3271073 35518234 ~ 35519242 (+)
G2232855 LOC100380853 other downstream 21975 38812650 ~ 38813379 (+)
LOC110521817 LOC106584021 other downstream 1009598 39800038 ~ 39812756 (+)
pik3r3b LOC106584012 other downstream 1352946 40143590 ~ 40468579 (+)
LOC110521828 LOC106584006 other downstream 2311763 41101017 ~ 41158001 (+)

Expression



Co-expression Network