G2232856


Basic Information

Item Value
gene id G2232856
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 38814706 ~ 38878511 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2552957
ttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttgtccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcaatggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtggatttatacggagacttgattacacacaggtggatttatacggagacttgattac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2552957 True 457 lncRNA 0.45 2 38814706 38878511

Neighbor

gene id symbol gene type direction distance location
LOC110521800 LOC100286690 coding upstream 529609 38230452 ~ 38285097 (+)
LOC118945881 NA coding upstream 553321 38261239 ~ 38261385 (+)
LOC110521799 NA coding upstream 589903 38223112 ~ 38224803 (+)
LOC118945789 NA coding upstream 758066 38038367 ~ 38056640 (+)
insl5a rel3 coding upstream 1227705 37584989 ~ 37587002 (+)
LOC110521001 LOC106584026 coding downstream 238973 39117484 ~ 39202411 (+)
LOC110521810 LOC106584025 coding downstream 360099 39238610 ~ 39332571 (+)
LOC110521814 dmrt2b coding downstream 834513 39713024 ~ 39722927 (+)
LOC110521815 fam183a coding downstream 881390 39759901 ~ 39761629 (+)
LOC110521003 LOC106584022 coding downstream 893935 39772446 ~ 39799482 (+)
G2232660 NA non-coding upstream 24928 38789534 ~ 38789778 (+)
G2232655 NA non-coding upstream 33882 38780581 ~ 38780824 (+)
G2232648 NA non-coding upstream 43149 38771334 ~ 38771557 (+)
G2232583 pgm1 non-coding upstream 64250 38747444 ~ 38750456 (+)
G2232586 NA non-coding upstream 68172 38746025 ~ 38746534 (+)
G2233172 NA non-coding downstream 454701 39333212 ~ 39333482 (+)
G2233192 NA non-coding downstream 493314 39371825 ~ 39372175 (+)
G2233304 NA non-coding downstream 684864 39563375 ~ 39612899 (+)
G2232855 LOC100380853 other upstream 1327 38812650 ~ 38813379 (+)
G2232661 LOC105030512 other upstream 24031 38790315 ~ 38790675 (+)
G2231371 NA other upstream 477725 38315783 ~ 38336981 (+)
LOC110521770 igfbp-1a2 other upstream 3011738 35800643 ~ 35805071 (+)
LOC110521817 LOC106584021 other downstream 921762 39800038 ~ 39812756 (+)
pik3r3b LOC106584012 other downstream 1265110 40143590 ~ 40468579 (+)
LOC110521828 LOC106584006 other downstream 2223927 41101017 ~ 41158001 (+)
G2236045 NA other downstream 2507149 41385660 ~ 41385993 (+)

Expression


Co-expression Network