G2233172


Basic Information

Item Value
gene id G2233172
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 39333212 ~ 39333482 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2553314
caagactcttcctagagctgagttcacggccaaactgagcaatcggaggagaagggccatggtcagggaggtgaccaagaacccaatggtcactctgctAGAGCTCAAGAGTTTCttcgtggagatgggagaaccttccagaaggacaagcgtctctgcagcactccaccaaacaggccattatggtagagtggccagacggaagccactcctcggtaaaaggcacgtgacagcccgcttggagttttccaaaaggcacctaaaaactctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2553314 True 271 lncRNA 0.53 1 39333212 39333482

Neighbor

gene id symbol gene type direction distance location
LOC110521810 LOC106584025 coding upstream 641 39238610 ~ 39332571 (+)
LOC110521001 LOC106584026 coding upstream 130801 39117484 ~ 39202411 (+)
LOC110521807 NA coding upstream 494487 38833784 ~ 38838725 (+)
LOC110521800 LOC100286690 coding upstream 1048115 38230452 ~ 38285097 (+)
LOC118945881 NA coding upstream 1071827 38261239 ~ 38261385 (+)
LOC110521814 dmrt2b coding downstream 379542 39713024 ~ 39722927 (+)
LOC110521815 fam183a coding downstream 426419 39759901 ~ 39761629 (+)
LOC110521003 LOC106584022 coding downstream 438964 39772446 ~ 39799482 (+)
trnaa-ugc-194 NA coding downstream 455675 39789157 ~ 39789229 (+)
LOC110521817 LOC106584021 coding downstream 466556 39800038 ~ 39812756 (+)
G2232856 NA non-coding upstream 454701 38814706 ~ 38878511 (+)
G2232873 NA non-coding upstream 488927 38840587 ~ 38844285 (+)
G2232859 NA non-coding upstream 510749 38821528 ~ 38822463 (+)
G2233192 NA non-coding downstream 38343 39371825 ~ 39372175 (+)
G2233304 NA non-coding downstream 229893 39563375 ~ 39612899 (+)
G2233859 NA non-coding downstream 294072 39627554 ~ 39627967 (+)
G2233867 NA non-coding downstream 301782 39635264 ~ 39635484 (+)
G2233874 NA non-coding downstream 307439 39640921 ~ 39641235 (+)
G2232855 LOC100380853 other upstream 519833 38812650 ~ 38813379 (+)
G2232661 LOC105030512 other upstream 542537 38790315 ~ 38790675 (+)
G2231371 NA other upstream 996231 38315783 ~ 38336981 (+)
insl5a rel3 other upstream 1746210 37584989 ~ 37587002 (+)
pik3r3b LOC106584012 other downstream 810139 40143590 ~ 40468579 (+)
LOC110521828 LOC106584006 other downstream 1768956 41101017 ~ 41158001 (+)
G2236045 NA other downstream 2052178 41385660 ~ 41385993 (+)
LOC110521840 LOC106583968 other downstream 3216838 42548328 ~ 42554269 (+)

Expression


Co-expression Network