G2233878


Basic Information

Item Value
gene id G2233878
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 39643647 ~ 39643867 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2554093
gacgcaaactcggtctcaacctttaagtctttactgaagactcatctcttcagtgggtcatatgattgagtgtagtctggcccaggagtgtgaaggtgaacggaaaggctctggagcaacgaacagcccttgctgtctctgcctggccggttcccctctttccactgggattctctgcctctaaccctattacaggggctgagtcactggcttactagggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2554093 True 221 lncRNA 0.52 1 39643647 39643867

Neighbor

gene id symbol gene type direction distance location
LOC110521810 LOC106584025 coding upstream 311076 39238610 ~ 39332571 (+)
LOC110521001 LOC106584026 coding upstream 441236 39117484 ~ 39202411 (+)
LOC110521807 NA coding upstream 804922 38833784 ~ 38838725 (+)
LOC110521800 LOC100286690 coding upstream 1358550 38230452 ~ 38285097 (+)
LOC110521814 dmrt2b coding downstream 69157 39713024 ~ 39722927 (+)
LOC110521815 fam183a coding downstream 116034 39759901 ~ 39761629 (+)
LOC110521003 LOC106584022 coding downstream 128579 39772446 ~ 39799482 (+)
trnaa-ugc-194 NA coding downstream 145290 39789157 ~ 39789229 (+)
LOC110521817 LOC106584021 coding downstream 156171 39800038 ~ 39812756 (+)
G2233874 NA non-coding upstream 2412 39640921 ~ 39641235 (+)
G2233867 NA non-coding upstream 8163 39635264 ~ 39635484 (+)
G2233859 NA non-coding upstream 15680 39627554 ~ 39627967 (+)
G2233304 NA non-coding upstream 30748 39563375 ~ 39612899 (+)
G2233192 NA non-coding upstream 271472 39371825 ~ 39372175 (+)
G2234002 LOC106584020 non-coding downstream 206730 39850597 ~ 39852270 (+)
G2234003 LOC106584020 non-coding downstream 208583 39852450 ~ 39855097 (+)
G2234031 NA non-coding downstream 267131 39910998 ~ 39911462 (+)
G2234224 NA non-coding downstream 285445 39929312 ~ 39929520 (+)
G2232855 LOC100380853 other upstream 830268 38812650 ~ 38813379 (+)
G2232661 LOC105030512 other upstream 852972 38790315 ~ 38790675 (+)
G2231371 NA other upstream 1306666 38315783 ~ 38336981 (+)
insl5a rel3 other upstream 2056645 37584989 ~ 37587002 (+)
pik3r3b LOC106584012 other downstream 499754 40143590 ~ 40468579 (+)
LOC110521828 LOC106584006 other downstream 1458571 41101017 ~ 41158001 (+)
G2236045 NA other downstream 1741793 41385660 ~ 41385993 (+)
LOC110521840 LOC106583968 other downstream 2906453 42548328 ~ 42554269 (+)

Expression


Co-expression Network