Gene
RNA
| Item | Value |
|---|---|
| gene id | G2234003 |
| gene name | LOC106584020 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 39852450 ~ 39855097 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| leucine-rich repeat-containing protein 19-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2554221 | True | 1188 | lncRNA | 0.43 | 2 | 39852450 | 39855097 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521817 | LOC106584021 | coding | upstream | 43800 | 39800038 ~ 39812756 (+) |
| LOC110521003 | LOC106584022 | coding | upstream | 52968 | 39772446 ~ 39799482 (+) |
| trnaa-ugc-194 | NA | coding | upstream | 63221 | 39789157 ~ 39789229 (+) |
| LOC110521815 | fam183a | coding | upstream | 90821 | 39759901 ~ 39761629 (+) |
| LOC110521814 | dmrt2b | coding | upstream | 129523 | 39713024 ~ 39722927 (+) |
| LOC110521820 | LOC106584018 | coding | downstream | 22748 | 39877845 ~ 39906318 (+) |
| LOC110521821 | LOC106584017 | coding | downstream | 56420 | 39911517 ~ 39918494 (+) |
| LOC110521822 | pr38a | coding | downstream | 65767 | 39920864 ~ 39924501 (+) |
| LOC110521823 | pomgnt1 | coding | downstream | 75909 | 39931006 ~ 39957917 (+) |
| LOC118945792 | NA | coding | downstream | 104200 | 39959297 ~ 39960096 (+) |
| G2234002 | LOC106584020 | non-coding | upstream | 180 | 39850597 ~ 39852270 (+) |
| G2233878 | NA | non-coding | upstream | 208583 | 39643647 ~ 39643867 (+) |
| G2233874 | NA | non-coding | upstream | 211215 | 39640921 ~ 39641235 (+) |
| G2233867 | NA | non-coding | upstream | 216966 | 39635264 ~ 39635484 (+) |
| G2234031 | NA | non-coding | downstream | 55901 | 39910998 ~ 39911462 (+) |
| G2234224 | NA | non-coding | downstream | 74215 | 39929312 ~ 39929520 (+) |
| G2234313 | LOC100194703 | non-coding | downstream | 244683 | 40099780 ~ 40100114 (+) |
| G2234323 | NA | non-coding | downstream | 257676 | 40112773 ~ 40113015 (+) |
| G2234330 | NA | non-coding | downstream | 269451 | 40124548 ~ 40124761 (+) |
| LOC110521001 | LOC106584026 | other | upstream | 675757 | 39117484 ~ 39202411 (+) |
| G2232855 | LOC100380853 | other | upstream | 1039071 | 38812650 ~ 38813379 (+) |
| G2232661 | LOC105030512 | other | upstream | 1061775 | 38790315 ~ 38790675 (+) |
| G2231371 | NA | other | upstream | 1515469 | 38315783 ~ 38336981 (+) |
| pik3r3b | LOC106584012 | other | downstream | 288524 | 40143590 ~ 40468579 (+) |
| LOC110521828 | LOC106584006 | other | downstream | 1247341 | 41101017 ~ 41158001 (+) |
| G2236045 | NA | other | downstream | 1530563 | 41385660 ~ 41385993 (+) |
| LOC110521840 | LOC106583968 | other | downstream | 2695223 | 42548328 ~ 42554269 (+) |
| G2237341 | NA | other | downstream | 2874755 | 42729852 ~ 42730451 (+) |
