G2234224


Basic Information

Item Value
gene id G2234224
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 39929312 ~ 39929520 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2554470
ctcccgggtggtgcagtggtctagtgccaccagagactctgggtttgagctgctttgtcgcagctggccgcgaccgggaggtccatggggcgacgcacaattggcttagcgtcgtctgggttagggagggtttggccggtagggatatccttgtctcactagcgactcctgtggcgggccgggcacagtgcacactAACTcctttggta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2554470 True 209 lncRNA 0.61 1 39929312 39929520

Neighbor

gene id symbol gene type direction distance location
LOC110521822 pr38a coding upstream 4811 39920864 ~ 39924501 (+)
LOC110521821 LOC106584017 coding upstream 10818 39911517 ~ 39918494 (+)
LOC110521820 LOC106584018 coding upstream 22994 39877845 ~ 39906318 (+)
LOC110521817 LOC106584021 coding upstream 120662 39800038 ~ 39812756 (+)
LOC110521003 LOC106584022 coding upstream 129830 39772446 ~ 39799482 (+)
LOC110521823 pomgnt1 coding downstream 1486 39931006 ~ 39957917 (+)
LOC118945792 NA coding downstream 29777 39959297 ~ 39960096 (+)
pik3r3b LOC106584012 coding downstream 214070 40143590 ~ 40468579 (+)
LOC110521828 LOC106584006 coding downstream 1171497 41101017 ~ 41158001 (+)
LOC110521832 LOC106583970 coding downstream 1529361 41458881 ~ 41467520 (+)
G2234031 NA non-coding upstream 17850 39910998 ~ 39911462 (+)
G2234003 LOC106584020 non-coding upstream 74215 39852450 ~ 39855097 (+)
G2234002 LOC106584020 non-coding upstream 77042 39850597 ~ 39852270 (+)
G2233878 NA non-coding upstream 285445 39643647 ~ 39643867 (+)
G2234313 LOC100194703 non-coding downstream 170260 40099780 ~ 40100114 (+)
G2234323 NA non-coding downstream 183253 40112773 ~ 40113015 (+)
G2234330 NA non-coding downstream 195028 40124548 ~ 40124761 (+)
G2234339 NA non-coding downstream 212801 40142321 ~ 40142561 (+)
G2234345 NA non-coding downstream 218594 40148114 ~ 40148321 (+)
LOC110521001 LOC106584026 other upstream 752619 39117484 ~ 39202411 (+)
G2232855 LOC100380853 other upstream 1115933 38812650 ~ 38813379 (+)
G2232661 LOC105030512 other upstream 1138637 38790315 ~ 38790675 (+)
G2231371 NA other upstream 1592331 38315783 ~ 38336981 (+)
G2236045 NA other downstream 1456140 41385660 ~ 41385993 (+)
LOC110521840 LOC106583968 other downstream 2620800 42548328 ~ 42554269 (+)
G2237341 NA other downstream 2800332 42729852 ~ 42730451 (+)

Expression


Co-expression Network