Gene
RNA
| Item | Value |
|---|---|
| gene id | G2234345 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 40148114 ~ 40148321 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2554598 | True | 208 | lncRNA | 0.32 | 1 | 40148114 | 40148321 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118945792 | NA | coding | upstream | 188018 | 39959297 ~ 39960096 (+) |
| LOC110521823 | pomgnt1 | coding | upstream | 190197 | 39931006 ~ 39957917 (+) |
| LOC110521822 | pr38a | coding | upstream | 223613 | 39920864 ~ 39924501 (+) |
| LOC110521821 | LOC106584017 | coding | upstream | 229620 | 39911517 ~ 39918494 (+) |
| LOC110521820 | LOC106584018 | coding | upstream | 241796 | 39877845 ~ 39906318 (+) |
| LOC110521828 | LOC106584006 | coding | downstream | 952696 | 41101017 ~ 41158001 (+) |
| LOC110521832 | LOC106583970 | coding | downstream | 1310560 | 41458881 ~ 41467520 (+) |
| LOC110520957 | LOC106583970 | coding | downstream | 1329164 | 41477485 ~ 41478421 (+) |
| LOC110521005 | LOC106560551 | coding | downstream | 1864254 | 42012575 ~ 42053669 (+) |
| LOC110521838 | LOC106583933 | coding | downstream | 2177938 | 42326259 ~ 42506540 (+) |
| G2234339 | NA | non-coding | upstream | 5553 | 40142321 ~ 40142561 (+) |
| G2234330 | NA | non-coding | upstream | 23353 | 40124548 ~ 40124761 (+) |
| G2234323 | NA | non-coding | upstream | 35099 | 40112773 ~ 40113015 (+) |
| G2234313 | LOC100194703 | non-coding | upstream | 48000 | 40099780 ~ 40100114 (+) |
| G2234224 | NA | non-coding | upstream | 218594 | 39929312 ~ 39929520 (+) |
| G2234348 | NA | non-coding | downstream | 5886 | 40154207 ~ 40197350 (+) |
| G2234396 | NA | non-coding | downstream | 61114 | 40209435 ~ 40209651 (+) |
| G2234404 | NA | non-coding | downstream | 73603 | 40221924 ~ 40222134 (+) |
| G2234405 | NA | non-coding | downstream | 74864 | 40223185 ~ 40223546 (+) |
| G2234407 | NA | non-coding | downstream | 79104 | 40227425 ~ 40227709 (+) |
| pik3r3b | LOC106584012 | other | upstream | 3332 | 40143590 ~ 40468579 (+) |
| LOC110521817 | LOC106584021 | other | upstream | 340064 | 39800038 ~ 39812756 (+) |
| LOC110521001 | LOC106584026 | other | upstream | 971421 | 39117484 ~ 39202411 (+) |
| G2232855 | LOC100380853 | other | upstream | 1334735 | 38812650 ~ 38813379 (+) |
| G2232661 | LOC105030512 | other | upstream | 1357439 | 38790315 ~ 38790675 (+) |
| G2236045 | NA | other | downstream | 1237339 | 41385660 ~ 41385993 (+) |
| LOC110521840 | LOC106583968 | other | downstream | 2401999 | 42548328 ~ 42554269 (+) |
| G2237341 | NA | other | downstream | 2581531 | 42729852 ~ 42730451 (+) |
| G2238623 | adgrl4 | other | downstream | 3292532 | 43440853 ~ 43465829 (+) |
