G2234414


Basic Information

Item Value
gene id G2234414
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 40251592 ~ 40252144 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2554669
atctagggggggtctagaacaggtttctaaagtttcggaactctaggtccgacggttcttttttagctccaacaaagctaactattggagccactgtctgtctctacgcaccccaatacgtccctccatccaagttgtattttagtgcaatttttttttcctttgattttttttgggaaaaatgactgatttactgttcatgggggttgcctaatcacacatatgaagttttggaaagatcagacttttttaacccttcgaaacagcccctgagacaccaattatggcacttccggttggcacaggaagttataaatcaacacatatcctcattggggtatgctgttacagaatcctgagttttaagtccttacgttaagaattgactgatctacacagggttgaatgcactatgtctatcaaactgcatgcattgtatgggtaaacacttttaggggcattttaaccacttccggttggtccaggaagcttagaatcaacacaggtagacctcatagtggcctgatggactggtaccgaagacaggttcata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2554669 True 553 lncRNA 0.42 1 40251592 40252144

Neighbor

gene id symbol gene type direction distance location
LOC118945792 NA coding upstream 291496 39959297 ~ 39960096 (+)
LOC110521823 pomgnt1 coding upstream 293675 39931006 ~ 39957917 (+)
LOC110521822 pr38a coding upstream 327091 39920864 ~ 39924501 (+)
LOC110521821 LOC106584017 coding upstream 333098 39911517 ~ 39918494 (+)
LOC110521820 LOC106584018 coding upstream 345274 39877845 ~ 39906318 (+)
LOC110521828 LOC106584006 coding downstream 848873 41101017 ~ 41158001 (+)
LOC110521832 LOC106583970 coding downstream 1206737 41458881 ~ 41467520 (+)
LOC110520957 LOC106583970 coding downstream 1225341 41477485 ~ 41478421 (+)
LOC110521005 LOC106560551 coding downstream 1760431 42012575 ~ 42053669 (+)
LOC110521838 LOC106583933 coding downstream 2074115 42326259 ~ 42506540 (+)
G2234413 NA non-coding upstream 4005 40246968 ~ 40247587 (+)
G2234412 NA non-coding upstream 9464 40241511 ~ 40242128 (+)
G2234411 NA non-coding upstream 12676 40238630 ~ 40238916 (+)
G2234407 NA non-coding upstream 23883 40227425 ~ 40227709 (+)
G2234405 NA non-coding upstream 28046 40223185 ~ 40223546 (+)
G2234423 NA non-coding downstream 11866 40264010 ~ 40264293 (+)
G2234426 NA non-coding downstream 18456 40270600 ~ 40270947 (+)
G2234434 NA non-coding downstream 33625 40285769 ~ 40286212 (+)
G2234341 NA non-coding downstream 43687 40295831 ~ 40297257 (+)
G2235502 NA non-coding downstream 801577 41053721 ~ 41054006 (+)
pik3r3b LOC106584012 other upstream 106810 40143590 ~ 40468579 (+)
LOC110521817 LOC106584021 other upstream 443542 39800038 ~ 39812756 (+)
LOC110521001 LOC106584026 other upstream 1074899 39117484 ~ 39202411 (+)
G2232855 LOC100380853 other upstream 1438213 38812650 ~ 38813379 (+)
G2232661 LOC105030512 other upstream 1460917 38790315 ~ 38790675 (+)
G2236045 NA other downstream 1133516 41385660 ~ 41385993 (+)
LOC110521840 LOC106583968 other downstream 2298176 42548328 ~ 42554269 (+)
G2237341 NA other downstream 2477708 42729852 ~ 42730451 (+)
G2238623 adgrl4 other downstream 3188709 43440853 ~ 43465829 (+)

Expression


Co-expression Network