G2234341


Basic Information

Item Value
gene id G2234341
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 40295831 ~ 40297257 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2554594
CATAGGTCATTCCTGCAGTGTAGACTGTCTGAAGCTAGTGCCTTACTGCTGTAGACTTATCATGTAGTTATCCATTTAGGATAGTGCGCTAAGCAACACGCCGCTAGGTAGATATGCCATTAGACAAAATTTATTGACAATCCATGATTGAATCATCTAGCCAAGACCATGgatgtatatataatatagtcCAATTAGATGATTAAGGTGTGGTCACTATGTTTTGTACATCTTTTGTTTGTGTTCCCCATACAACCATACGTTAGCGCCACAATGCTCATTTGGGGAAGAAATGTAATTACGTATTTCGTGAGTGTTGTGCGTTATTAACGTATGTCTAAGTTACTGCCTAGATCCACCAGCCTGGACAACAGGACGACAGTCCAGAACGACGATCCACAACCATGGCCATTCTTGTGGTGGGGCTGCAGCTTTCAGAAATCCTACCAGGTTAAACCACCAGAGGGGGACTGTCATGATTATCCACAAACCAGGACACCCTATGGTCATGCTTGTGGTGGGTTGCAACTTGCAGAATCCTTCCAAGATTGAACCCACCAGGAGGGGACTGTTATGACTGTCCTCTGAGGATACAAATAGGTCAGCTCAGCAATGGATGACTTCAACCAGACCCTCTGTGGGTGAGAGAAGAGGGAACTGGTGGGGGGGTTGATAGCTATCGTGGAgaaattacaagattatgttataatactgttaTTACATCAAATGGTTGTTGTATGCAACAGAATAGGGTTCTTAGAactctattgtgtctgtgtgaactgagAGGAGGTTCTGAGACTTAATTCTAGCAACTGATTTATTATGGTCTTGTCCTCTCTGAGACAATAACGTCATCtcccggacaatcactggtacggctgattagctgtcaTAAGTAAAGTATCTATAAAAGTGAATTTAAGTGGGACCATTATACTACTCTCTTCAAACCATTGTATTCTACTACTCTCATCACCACTGAGAACTATCGACACGGCTGCCTTGCCTCTCTTCAAATAATTATCTTCCAGCGCGAGTGGAAGCAGATTGagttctgtagttctgttcaggactacacgacAGGTCGCCGGATGCCGGGCGACGGCAGAGGAGAGCAACAGTAGGAGACGGGTGGGGACcccttttggacaatcagagccttacaagcgtgcCACAAAATGGCCCAACAACCTTTCCAAGAAAGCCTGGTTCTGACAGACATCCACAAAGAAACAAGACATTTACACGTAattacattcatgatttcttactccaaacgggtgcaaagtatatgattactttgagagtagtttctaaatgtaccaagtattatgtctctgtctctcgccctctccctctctatctcctttgTAACAAGCCGCCATATTGTGTCAGTCCGCTGGGGACCTGTTTaaatgtattaa

Function

NR:

description
PREDICTED: solute carrier family 2, facilitated glucose transporter member 1 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2554594 True 1427 lncRNA 0.44 1 40295831 40297257

Neighbor

gene id symbol gene type direction distance location
LOC118945792 NA coding upstream 335735 39959297 ~ 39960096 (+)
LOC110521823 pomgnt1 coding upstream 337914 39931006 ~ 39957917 (+)
LOC110521822 pr38a coding upstream 371330 39920864 ~ 39924501 (+)
LOC110521821 LOC106584017 coding upstream 377337 39911517 ~ 39918494 (+)
LOC110521820 LOC106584018 coding upstream 389513 39877845 ~ 39906318 (+)
LOC110521828 LOC106584006 coding downstream 803760 41101017 ~ 41158001 (+)
LOC110521832 LOC106583970 coding downstream 1161624 41458881 ~ 41467520 (+)
LOC110520957 LOC106583970 coding downstream 1180228 41477485 ~ 41478421 (+)
LOC110521005 LOC106560551 coding downstream 1715318 42012575 ~ 42053669 (+)
LOC110521838 LOC106583933 coding downstream 2029002 42326259 ~ 42506540 (+)
G2234434 NA non-coding upstream 9619 40285769 ~ 40286212 (+)
G2234426 NA non-coding upstream 24884 40270600 ~ 40270947 (+)
G2234423 NA non-coding upstream 31538 40264010 ~ 40264293 (+)
G2234414 NA non-coding upstream 43687 40251592 ~ 40252144 (+)
G2234413 NA non-coding upstream 48244 40246968 ~ 40247587 (+)
G2235502 NA non-coding downstream 756464 41053721 ~ 41054006 (+)
G2235509 NA non-coding downstream 770285 41067542 ~ 41067796 (+)
G2235510 NA non-coding downstream 774695 41071952 ~ 41072288 (+)
G2235525 NA non-coding downstream 790807 41088064 ~ 41088278 (+)
pik3r3b LOC106584012 other upstream 151049 40143590 ~ 40468579 (+)
LOC110521817 LOC106584021 other upstream 487781 39800038 ~ 39812756 (+)
LOC110521001 LOC106584026 other upstream 1119138 39117484 ~ 39202411 (+)
G2232855 LOC100380853 other upstream 1482452 38812650 ~ 38813379 (+)
G2232661 LOC105030512 other upstream 1505156 38790315 ~ 38790675 (+)
G2236045 NA other downstream 1088403 41385660 ~ 41385993 (+)
LOC110521840 LOC106583968 other downstream 2253063 42548328 ~ 42554269 (+)
G2237341 NA other downstream 2432595 42729852 ~ 42730451 (+)
G2238623 adgrl4 other downstream 3143596 43440853 ~ 43465829 (+)

Expression


Co-expression Network