G2235510


Basic Information

Item Value
gene id G2235510
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 41071952 ~ 41072288 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2555800
tttgtttttctatgttttggggcatttctatgttttcggcctagtatggttctcaatcagaggcaggtgtcattagttgtctctgattgagaatcatacttaggtagcctgggttgcactgtttgttggtgggtgattgtctatgttgatggcttgtttcagcacagtccatatgattagcttcacggttgttattttgtttactggttttgtatagtgttcagtgttcactactttctttattaaagattgaccatggacacttaccacgccgcgtattggtcctcagatccatctcgcctctcctcttcagatgaagaggaggacggccgtgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2555800 True 337 lncRNA 0.43 1 41071952 41072288

Neighbor

gene id symbol gene type direction distance location
pik3r3b LOC106584012 coding upstream 603373 40143590 ~ 40468579 (+)
LOC118945792 NA coding upstream 1111856 39959297 ~ 39960096 (+)
LOC110521823 pomgnt1 coding upstream 1114035 39931006 ~ 39957917 (+)
LOC110521822 pr38a coding upstream 1147451 39920864 ~ 39924501 (+)
LOC110521821 LOC106584017 coding upstream 1153458 39911517 ~ 39918494 (+)
LOC110521828 LOC106584006 coding downstream 28729 41101017 ~ 41158001 (+)
LOC110521832 LOC106583970 coding downstream 386593 41458881 ~ 41467520 (+)
LOC110520957 LOC106583970 coding downstream 405197 41477485 ~ 41478421 (+)
LOC110521005 LOC106560551 coding downstream 940287 42012575 ~ 42053669 (+)
LOC110521838 LOC106583933 coding downstream 1253971 42326259 ~ 42506540 (+)
G2235509 NA non-coding upstream 4156 41067542 ~ 41067796 (+)
G2235502 NA non-coding upstream 17946 41053721 ~ 41054006 (+)
G2234341 NA non-coding upstream 774695 40295831 ~ 40297257 (+)
G2234434 NA non-coding upstream 785740 40285769 ~ 40286212 (+)
G2234426 NA non-coding upstream 801005 40270600 ~ 40270947 (+)
G2235525 NA non-coding downstream 15776 41088064 ~ 41088278 (+)
G2235584 LOC106584002 non-coding downstream 195606 41267894 ~ 41281341 (+)
G2235936 NA non-coding downstream 228666 41300954 ~ 41301292 (+)
G2235948 NA non-coding downstream 235814 41308102 ~ 41308373 (+)
LOC110521817 LOC106584021 other upstream 1263902 39800038 ~ 39812756 (+)
LOC110521001 LOC106584026 other upstream 1895259 39117484 ~ 39202411 (+)
G2232855 LOC100380853 other upstream 2258573 38812650 ~ 38813379 (+)
G2232661 LOC105030512 other upstream 2281277 38790315 ~ 38790675 (+)
G2236045 NA other downstream 313372 41385660 ~ 41385993 (+)
LOC110521840 LOC106583968 other downstream 1478032 42548328 ~ 42554269 (+)
G2237341 NA other downstream 1657564 42729852 ~ 42730451 (+)
G2238623 adgrl4 other downstream 2368565 43440853 ~ 43465829 (+)

Expression


Co-expression Network