G2236226


Basic Information

Item Value
gene id G2236226
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 41552511 ~ 41553042 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2556579
agttgccctggctgtgtgtttcgggtcgttgtcatgctggaagacccagccacgacccatcttcaatgctcttactgagggaaggaggttgttggccaagaacTCGCgacacatggccccatccatcctcccctcaatacggtgcagtcgtcctgtcccctttgcagaaaagcatccccaaagaatgatgtttccacctccatgcttcacggttgggatggtattcttggggttgtactcatccttcttcttcctccaaacaccgCGAGTGGattttagaccaaaaagctctatttttgtctcatcagaccacatgaccttctcccattcctcctctggatcatccagctGGTCACTGgaaaacttcagacaggcctggacatgcgctggcttgagcagggggaccttgtgtgtgctgcaggattttaatccatgacggcgtagtgtgttactaatggttttctttgagactgtggtcccagctctcttcaggtcattgaccaggtcctgccgtgtagttctgggctgattc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2556579 True 532 lncRNA 0.52 1 41552511 41553042

Neighbor

gene id symbol gene type direction distance location
LOC110520957 LOC106583970 coding upstream 74090 41477485 ~ 41478421 (+)
LOC110521832 LOC106583970 coding upstream 84991 41458881 ~ 41467520 (+)
LOC110521828 LOC106584006 coding upstream 394510 41101017 ~ 41158001 (+)
pik3r3b LOC106584012 coding upstream 1083932 40143590 ~ 40468579 (+)
LOC118945792 NA coding upstream 1592415 39959297 ~ 39960096 (+)
LOC110521005 LOC106560551 coding downstream 459533 42012575 ~ 42053669 (+)
LOC110521838 LOC106583933 coding downstream 773217 42326259 ~ 42506540 (+)
LOC110521840 LOC106583968 coding downstream 995286 42548328 ~ 42554269 (+)
LOC110521842 LOC105011996 coding downstream 1103114 42656156 ~ 42664378 (+)
LOC110521843 pde6d coding downstream 1132771 42685813 ~ 42692514 (+)
G2236181 NA non-coding upstream 56724 41495517 ~ 41495787 (+)
G2236056 LOC106583972 non-coding upstream 128917 41422760 ~ 41423594 (+)
G2235948 NA non-coding upstream 244138 41308102 ~ 41308373 (+)
G2235936 NA non-coding upstream 251219 41300954 ~ 41301292 (+)
G2235584 LOC106584002 non-coding upstream 271170 41267894 ~ 41281341 (+)
G2236227 NA non-coding downstream 43 41553085 ~ 41554453 (+)
G2236228 NA non-coding downstream 1421 41554463 ~ 41554733 (+)
G2236232 NA non-coding downstream 7313 41560355 ~ 41560600 (+)
G2236233 NA non-coding downstream 7997 41561039 ~ 41561903 (+)
G2236234 NA non-coding downstream 9173 41562215 ~ 41562453 (+)
G2236045 NA other upstream 166518 41385660 ~ 41385993 (+)
LOC110521817 LOC106584021 other upstream 1744461 39800038 ~ 39812756 (+)
LOC110521001 LOC106584026 other upstream 2375818 39117484 ~ 39202411 (+)
G2237341 NA other downstream 1176810 42729852 ~ 42730451 (+)
G2238623 adgrl4 other downstream 1887811 43440853 ~ 43465829 (+)
G2238671 LOC100136747 other downstream 2055539 43608581 ~ 43623303 (+)
G2239435 LOC106583900 other downstream 2846843 44399885 ~ 44427686 (+)

Expression


Co-expression Network