G2236801


Basic Information

Item Value
gene id G2236801
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 41943263 ~ 41943463 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2557184
ccacaacatacggtgatcgctacataaatagtcatattaaacattcatgaaaatacaagtgtctcacatgtatcgaaagcctagaatcttgctaatccaactgcgttgtcagattcaaaaaaggatttactgcgaaagaatacgatgcgattatctgagcatagagccccataaaaaacaactatttcaaccagcacaggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2557184 True 201 lncRNA 0.38 1 41943263 41943463

Neighbor

gene id symbol gene type direction distance location
LOC110520957 LOC106583970 coding upstream 464842 41477485 ~ 41478421 (+)
LOC110521832 LOC106583970 coding upstream 475743 41458881 ~ 41467520 (+)
LOC110521828 LOC106584006 coding upstream 785262 41101017 ~ 41158001 (+)
pik3r3b LOC106584012 coding upstream 1474684 40143590 ~ 40468579 (+)
LOC118945792 NA coding upstream 1983167 39959297 ~ 39960096 (+)
LOC110521005 LOC106560551 coding downstream 69112 42012575 ~ 42053669 (+)
LOC110521838 LOC106583933 coding downstream 382796 42326259 ~ 42506540 (+)
LOC110521840 LOC106583968 coding downstream 604865 42548328 ~ 42554269 (+)
LOC110521842 LOC105011996 coding downstream 712693 42656156 ~ 42664378 (+)
LOC110521843 pde6d coding downstream 742350 42685813 ~ 42692514 (+)
G2236793 NA non-coding upstream 5107 41937936 ~ 41938156 (+)
G2236773 NA non-coding upstream 15960 41926966 ~ 41927303 (+)
G2236770 NA non-coding upstream 21416 41921397 ~ 41921847 (+)
G2236769 NA non-coding upstream 21921 41919831 ~ 41921342 (+)
G2236565 NA non-coding upstream 144625 41787842 ~ 41798638 (+)
G2236804 NA non-coding downstream 2536 41945999 ~ 41946237 (+)
G2236851 NA non-coding downstream 36436 41979899 ~ 41981635 (+)
G2236904 LOC106613263 non-coding downstream 79003 42022466 ~ 42022751 (+)
G2236956 NA non-coding downstream 149846 42093309 ~ 42101005 (+)
G2237062 NA non-coding downstream 294816 42238279 ~ 42238581 (+)
G2236045 NA other upstream 557270 41385660 ~ 41385993 (+)
LOC110521817 LOC106584021 other upstream 2135213 39800038 ~ 39812756 (+)
LOC110521001 LOC106584026 other upstream 2766570 39117484 ~ 39202411 (+)
G2237341 NA other downstream 786389 42729852 ~ 42730451 (+)
G2238623 adgrl4 other downstream 1497390 43440853 ~ 43465829 (+)
G2238671 LOC100136747 other downstream 1665118 43608581 ~ 43623303 (+)
G2239435 LOC106583900 other downstream 2456422 44399885 ~ 44427686 (+)

Expression


Co-expression Network