G2236851


Basic Information

Item Value
gene id G2236851
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 41979899 ~ 41981635 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2557238
gaaatgatgtaaatgtatcactagccactttaaacaatgctaccttatataatgttacttaccctacattattcatctcatatgcatacgtatatactgtactctatatcatcgactgcatccttatgtaatacatgtatcactagccactttaactatgccactttgtttacatactcacctcatgtatatgctgtactcgataccatctactgtatcctgcctatgctgctctgtaccatcactcattcatatatccttatgtacatattctttatccccttacactgtgtataagacagtagttttggaattgttagttagattacttgttggttattactgcattgtcggaactagaagcacaagcatttcgctacactcgcattaacatctgctaaccatgtgtatgtgacaaataacatttgatttgatttgatttgtatgccagagccaagatgatttggagtaTTCCAACCTGAGACTACCTCACCAGGTATTCCTCTTCTGTTCTCATGCTGGAGACCAGGGCTTGATTACAACATGTTACAATGGTGCCAACATTTTGTGGCTGATCTTTCAGCGGGGAAGTGGATGAATGtgtcaaagacctgactgggCCCAGCACCACAAGGTATGGTTTGTTATTTTTCATCGGCATGTTTGTGTACTGAGGAACATGTAACTTGGTTCCAGAACACTTTCAATTTCTTTAGGTTGGAGGCTTTCATCGAGGTAAGTGTTTCTTGGTGTAACGTCATCCCCAGGATATTGCACACCATTCAAAGTTGGCCTTAGTAGGAGTGACCTTAAAGAATTTGTCATCGTCATTACTTAACAAAGTCAAAAGTCATCATTATTGCTAAACCCTGCCCCTTTCCACAATTTACCTAGTTAAGATTTGATTTTAAGCATAACCCTAACTAATGAAGGCCAAGTTTGATGTGTTGGTCCACAAGATCTTCCGTGCAGTTGGGCGGAAGTGTCTGGGAACGAGATTAGGTGTAATCACTTTAGAGCGTATGCCATCCTTCAGCGTAACATctcaccctttataaagcacgTTTATATcatatgtcacatttgacattggtgatTGTCATTTATGAGCCCTATATAAACATGATATAAGTCATAAGCCATCAAACACAATCTGTCCACTTGTGACAACCAGCCCCATCGAAGGGTTGGTTGTCACACggtatggggttggttgtcacaatgTTTGCTAGTAGCTTATTCCATTGCAACTGGAAATTAAGCAATATAGCATAAAGTCTTAGAAATAGCCAAACCTTTCTTTGATTTAACCATATTCCTTAAATTCAGCATTTAATGCTTTGAAAACAacatattacattttgagtttgtgtGGGTGTTTGACAGAaataatgtgtgtgagagagagaagcaacAAACTCAGATAGCACAGATACCTCTGCCCAACAGATGTATACATGATGAATCAGGAAGATGCAGTTTATAGATTGCAGATGTATTTAGAATAACTACATTCTCATTTTTACAGTTCtactgttaaggttttcttcttcctctgaagaggaggtgtagcagggatcggaccaaatatggctgcctaaatatggttcccaatcagagacaacgataaacacctgcatctgattgagaaccactccaggcaaccatagactttcctagactactatactattccacaatcccataacctacaaacaacccctagacaaaacacac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2557238 True 1737 lncRNA 0.39 1 41979899 41981635

Neighbor

gene id symbol gene type direction distance location
LOC110520957 LOC106583970 coding upstream 501478 41477485 ~ 41478421 (+)
LOC110521832 LOC106583970 coding upstream 512379 41458881 ~ 41467520 (+)
LOC110521828 LOC106584006 coding upstream 821898 41101017 ~ 41158001 (+)
pik3r3b LOC106584012 coding upstream 1511320 40143590 ~ 40468579 (+)
LOC118945792 NA coding upstream 2019803 39959297 ~ 39960096 (+)
LOC110521005 LOC106560551 coding downstream 30940 42012575 ~ 42053669 (+)
LOC110521838 LOC106583933 coding downstream 344624 42326259 ~ 42506540 (+)
LOC110521840 LOC106583968 coding downstream 566693 42548328 ~ 42554269 (+)
LOC110521842 LOC105011996 coding downstream 674521 42656156 ~ 42664378 (+)
LOC110521843 pde6d coding downstream 704178 42685813 ~ 42692514 (+)
G2236804 NA non-coding upstream 33662 41945999 ~ 41946237 (+)
G2236801 NA non-coding upstream 36436 41943263 ~ 41943463 (+)
G2236793 NA non-coding upstream 41743 41937936 ~ 41938156 (+)
G2236773 NA non-coding upstream 52596 41926966 ~ 41927303 (+)
G2236770 NA non-coding upstream 58052 41921397 ~ 41921847 (+)
G2236904 LOC106613263 non-coding downstream 40831 42022466 ~ 42022751 (+)
G2236956 NA non-coding downstream 111674 42093309 ~ 42101005 (+)
G2237062 NA non-coding downstream 256644 42238279 ~ 42238581 (+)
G2237063 NA non-coding downstream 257021 42238656 ~ 42238866 (+)
G2237064 NA non-coding downstream 257333 42238968 ~ 42239260 (+)
G2236045 NA other upstream 593906 41385660 ~ 41385993 (+)
LOC110521817 LOC106584021 other upstream 2171849 39800038 ~ 39812756 (+)
LOC110521001 LOC106584026 other upstream 2803206 39117484 ~ 39202411 (+)
G2237341 NA other downstream 748217 42729852 ~ 42730451 (+)
G2238623 adgrl4 other downstream 1459218 43440853 ~ 43465829 (+)
G2238671 LOC100136747 other downstream 1626946 43608581 ~ 43623303 (+)
G2239435 LOC106583900 other downstream 2418250 44399885 ~ 44427686 (+)

Expression


Co-expression Network