G2236904 (LOC106613263)


Basic Information

Item Value
gene id G2236904
gene name LOC106613263
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 42022466 ~ 42022751 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2557292
gccctgcaaaatgacctccatcaggccacaaatgtgcatgtgtctactcaaacggtcagaaacagactccatgacgGTGGTATgaaggcccgacgtccacaggtgggggttgtgcttacagcccaacaccgtgcaggacgtttggcatttgccagagaacaccaaggttggcaaattcgccactggcgccctgtgctcttcacagatgaaagcaggttcacactgagcacacgtgacagacgtgacagtctggagacgccgtggagaacgttctgctgcctgcaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2557292 True 286 lncRNA 0.55 1 42022466 42022751

Neighbor

gene id symbol gene type direction distance location
LOC110520957 LOC106583970 coding upstream 544045 41477485 ~ 41478421 (+)
LOC110521832 LOC106583970 coding upstream 554946 41458881 ~ 41467520 (+)
LOC110521828 LOC106584006 coding upstream 864465 41101017 ~ 41158001 (+)
pik3r3b LOC106584012 coding upstream 1553887 40143590 ~ 40468579 (+)
LOC118945792 NA coding upstream 2062370 39959297 ~ 39960096 (+)
LOC110521838 LOC106583933 coding downstream 303508 42326259 ~ 42506540 (+)
LOC110521840 LOC106583968 coding downstream 525577 42548328 ~ 42554269 (+)
LOC110521842 LOC105011996 coding downstream 633405 42656156 ~ 42664378 (+)
LOC110521843 pde6d coding downstream 663062 42685813 ~ 42692514 (+)
LOC110521844 phb2 coding downstream 671114 42693865 ~ 42705266 (+)
G2236851 NA non-coding upstream 40831 41979899 ~ 41981635 (+)
G2236804 NA non-coding upstream 76229 41945999 ~ 41946237 (+)
G2236801 NA non-coding upstream 79003 41943263 ~ 41943463 (+)
G2236793 NA non-coding upstream 84310 41937936 ~ 41938156 (+)
G2236773 NA non-coding upstream 95163 41926966 ~ 41927303 (+)
G2236956 NA non-coding downstream 70558 42093309 ~ 42101005 (+)
G2237062 NA non-coding downstream 215528 42238279 ~ 42238581 (+)
G2237063 NA non-coding downstream 215905 42238656 ~ 42238866 (+)
G2237064 NA non-coding downstream 216217 42238968 ~ 42239260 (+)
G2237067 NA non-coding downstream 219005 42241756 ~ 42242013 (+)
G2236045 NA other upstream 636473 41385660 ~ 41385993 (+)
LOC110521817 LOC106584021 other upstream 2214416 39800038 ~ 39812756 (+)
LOC110521001 LOC106584026 other upstream 2845773 39117484 ~ 39202411 (+)
G2237341 NA other downstream 707101 42729852 ~ 42730451 (+)
G2238623 adgrl4 other downstream 1418102 43440853 ~ 43465829 (+)
G2238671 LOC100136747 other downstream 1585830 43608581 ~ 43623303 (+)
G2239435 LOC106583900 other downstream 2377134 44399885 ~ 44427686 (+)

Expression


Co-expression Network